diff options
Diffstat (limited to 'uploader')
| -rw-r--r-- | uploader/phenotypes/views.py | 23 |
1 files changed, 14 insertions, 9 deletions
diff --git a/uploader/phenotypes/views.py b/uploader/phenotypes/views.py index d2c5be1..cf1f5c7 100644 --- a/uploader/phenotypes/views.py +++ b/uploader/phenotypes/views.py @@ -868,6 +868,17 @@ def process_phenotype_data_for_download(pheno: dict) -> dict: } +BULK_EDIT_COMMON_FIELDNAMES = [ + "UniqueIdentifier", + "Post_publication_description", + "Pre_publication_abbreviation", + "Pre_publication_description", + "Original_description", + "Post_publication_abbreviation", + "PubMed_ID" +] + + @phenotypesbp.route( "<int:species_id>/populations/<int:population_id>/phenotypes/datasets" "/<int:dataset_id>/edit-download", @@ -915,15 +926,9 @@ def edit_download_phenotype_data(# pylint: disable=[unused-argument] "comment line. This line, and all the lines above it, are " "all comment lines. Comment lines will be ignored.\n") writer = csv.DictWriter(outfile, - fieldnames=[ - "UniqueIdentifier", - "Post_publication_description", - "Pre_publication_abbreviation", - "Pre_publication_description", - "Original_description", - "Post_publication_abbreviation", - "PubMed_ID" - ] + samples_list, + fieldnames= ( + BULK_EDIT_COMMON_FIELDNAMES + + samples_list), dialect="excel-tab") writer.writeheader() writer.writerows(data) |