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-rw-r--r--uploader/templates/phenotypes/bulk-edit-upload.html61
-rw-r--r--uploader/templates/phenotypes/view-dataset.html42
2 files changed, 95 insertions, 8 deletions
diff --git a/uploader/templates/phenotypes/bulk-edit-upload.html b/uploader/templates/phenotypes/bulk-edit-upload.html
new file mode 100644
index 0000000..926bcf5
--- /dev/null
+++ b/uploader/templates/phenotypes/bulk-edit-upload.html
@@ -0,0 +1,61 @@
+{%extends "phenotypes/base.html"%}
+{%from "flash_messages.html" import flash_all_messages%}
+{%from "macro-table-pagination.html" import table_pagination%}
+{%from "populations/macro-display-population-card.html" import display_population_card%}
+
+{%block title%}Phenotypes{%endblock%}
+
+{%block pagetitle%}Phenotypes{%endblock%}
+
+{%block lvl4_breadcrumbs%}
+<li {%if activelink=="view-dataset"%}
+ class="breadcrumb-item active"
+ {%else%}
+ class="breadcrumb-item"
+ {%endif%}>
+ <a href="{{url_for('species.populations.phenotypes.view_dataset',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id)}}">View</a>
+</li>
+{%endblock%}
+
+{%block contents%}
+<div class="row">
+ <p>Upload the edited file you downloaded and edited.</p>
+</div>
+
+<div class="row">
+ <form id="frm-bulk-edit-upload"
+ class="form-horizontal"
+ method="POST"
+ action="{{url_for(
+ 'species.populations.phenotypes.edit_upload_phenotype_data',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id)}}"
+ enctype="multipart/form-data">
+
+ <div class="form-group row">
+ <label for="file-upload-bulk-edit-upload"
+ class="form-label col-form-label col-sm-2">
+ Edited File</label>
+ <div class="col-sm-10">
+ <input id="file-upload-bulk-edit-upload"
+ name="file_upload_bulk_edit_upload"
+ class="form-control"
+ type="file"
+ required="required" />
+ </div>
+ </div>
+
+ <input type="submit" class="btn btn-primary"
+ value="upload to edit" />
+
+ </form>
+</div>
+{%endblock%}
+
+
+{%block javascript%}
+{%endblock%}
diff --git a/uploader/templates/phenotypes/view-dataset.html b/uploader/templates/phenotypes/view-dataset.html
index fa1044b..21563d6 100644
--- a/uploader/templates/phenotypes/view-dataset.html
+++ b/uploader/templates/phenotypes/view-dataset.html
@@ -147,6 +147,8 @@
},
{
text: "Bulk Edit (Download Data)",
+ className: "btn btn-info btn-bulk-edit",
+ titleAttr: "Click to download data for editing.",
action: (event, dt, node, config) => {
var phenoids = [];
var selected = dt.rows({selected: true, page: "all"}).data();
@@ -160,10 +162,23 @@
alert("No record selected. Nothing to do!");
return false;
}
+
+ $(".btn-bulk-edit").prop("disabled", true);
+ $(".btn-bulk-edit").addClass("d-none");
+ var spinner = $(
+ "<div id='bulk-edit-spinner' class='spinner-grow text-info'>");
+ spinner_content = $(
+ "<span class='visually-hidden'>");
+ spinner_content.html(
+ "Downloading data &hellip;");
+ spinner.append(spinner_content)
+ $(".btn-bulk-edit").parent().append(
+ spinner);
+
$.ajax(
(`/species/${species_id}/populations/` +
`${population_id}/phenotypes/datasets/` +
- `${dataset_id}/download`),
+ `${dataset_id}/edit-download`),
{
method: "POST",
data: JSON.stringify(phenoids),
@@ -185,19 +200,30 @@
console.log("Experienced an error: ", textStatus);
console.log("The ERROR: ", errorThrown);
},
+ complete: (jqXHR, textStatus) => {
+ $("#bulk-edit-spinner").remove();
+ $(".btn-bulk-edit").removeClass(
+ "d-none");
+ $(".btn-bulk-edit").prop(
+ "disabled", false);
+ },
contentType: "application/json"
});
- },
- className: "btn btn-info",
- titleAttr: "Click to download data for editing."
+ }
},
{
text: "Bulk Edit (Upload Data)",
+ className: "btn btn-info btn-bulk-edit",
+ titleAttr: "Click to upload edited data you got by clicking the `Bulk Edit (Download Data)` button.",
action: (event, dt, node, config) => {
- alert("Not implemented yet!")
- },
- className: "btn btn-info",
- titleAttr: "Click to upload edited data you got by clicking the `Bulk Edit (Download Data)` button."
+ window.location.assign(
+ `${window.location.protocol}//` +
+ `${window.location.host}` +
+ `/species/${species_id}` +
+ `/populations/${population_id}` +
+ `/phenotypes/datasets/${dataset_id}` +
+ `/edit-upload`)
+ }
}
]
},