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Diffstat (limited to 'uploader/templates/rqtl2/select-probeset-study-id.html')
| -rw-r--r-- | uploader/templates/rqtl2/select-probeset-study-id.html | 143 |
1 files changed, 0 insertions, 143 deletions
diff --git a/uploader/templates/rqtl2/select-probeset-study-id.html b/uploader/templates/rqtl2/select-probeset-study-id.html deleted file mode 100644 index e3fd9cc..0000000 --- a/uploader/templates/rqtl2/select-probeset-study-id.html +++ /dev/null @@ -1,143 +0,0 @@ -{%extends "base.html"%} -{%from "flash_messages.html" import flash_messages %} - -{%block title%}Upload R/qtl2 Bundle{%endblock%} - -{%block contents%} -<h2 class="heading">Phenotype(ProbeSet) Study</h2> - -<div class="row"> - <p>The R/qtl2 bundle you uploaded contains (a) "<strong>pheno</strong>" - file(s). This data needs to be organised under a study.</p> - <p>In this page, you can either select from a existing dataset:</p> - - <form method="POST" - action="{{url_for('expression-data.rqtl2.select_probeset_study', - species_id=species.SpeciesId, population_id=population.Id)}}" - id="frm:select-probeset-study"> - <legend class="heading">Select from existing ProbeSet studies</legend> - {{flash_messages("error-rqtl2-select-probeset-study")}} - - <input type="hidden" name="species_id" value="{{species.SpeciesId}}" /> - <input type="hidden" name="population_id" - value="{{population.InbredSetId}}" /> - <input type="hidden" name="rqtl2_bundle_file" - value="{{rqtl2_bundle_file}}" /> - <input type="hidden" name="geno-dataset-id" value="{{geno_dataset.Id}}" /> - <input type="hidden" name="tissueid" value="{{tissue.Id}}" /> - - <div> - <label for="select:probe-study" class="form-label">Study</label> - <select id="select:probe-study" - name="probe-study-id" - required="required" - aria-describedby="help-select-probeset-study" - {%if studies | length == 0%}disabled="disabled"{%endif%} - class="form-control"> - <option value="">Select a study</option> - {%for study in studies%} - <option value={{study.Id}}> - {{study.Name}} - {%if study.FullName%} - -- ({{study.FullName}}) - {%endif%} - </option> - {%endfor%} - </select> - <small id="help-select-probeset-study" class="form-text text-muted"> - Select from existing ProbeSet studies. - </small> - </div> - - <button type="submit" class="btn btn-primary">select study</button> - </form> -</div> - -<div class="row"> - <p style="color:#FE3535; padding-left:20em; font-weight:bolder;">OR</p> -</div> - -<div class="row"> - - <p>Create a new ProbeSet dataset below:</p> - - <form method="POST" - action="{{url_for('expression-data.rqtl2.create_probeset_study', - species_id=species.SpeciesId, population_id=population.Id)}}" - id="frm:create-probeset-study"> - <legend class="heading">Create new ProbeSet study</legend> - - {{flash_messages("error-rqtl2-create-probeset-study")}} - - <input type="hidden" name="species_id" value="{{species.SpeciesId}}" /> - <input type="hidden" name="population_id" - value="{{population.InbredSetId}}" /> - <input type="hidden" name="rqtl2_bundle_file" - value="{{rqtl2_bundle_file}}" /> - <input type="hidden" name="geno-dataset-id" value="{{geno_dataset.Id}}" /> - <input type="hidden" name="tissueid" value="{{tissue.Id}}" /> - - <div> - <label for="select:platform" class="form-label">Platform</label> - <select id="select:platform" - name="platformid" - required="required" - aria-describedby="help-select-platform" - {%if platforms | length == 0%}disabled="disabled"{%endif%} - class="form-control"> - <option value="">Select a platform</option> - {%for platform in platforms%} - <option value="{{platform.GeneChipId}}"> - {{platform.GeneChipName}} ({{platform.Name}}) - </option> - {%endfor%} - </select> - <small id="help-select-platform" class="form-text text-muted"> - Select from a list of known genomics platforms. - </small> - </div> - - <div class="form-group"> - <label for="txt:studyname" class="form-label">Study name</label> - <input type="text" id="txt:studyname" name="studyname" - placeholder="Name of the study. (Required)" - required="required" - maxlength="100" - class="form-control" /> - <span class="form-text text-muted" id="help-study-name"> - Provide a name for the study.</span> - </div> - - <div class="form-group"> - <label for="txt:studyfullname" class="form-label">Full Study Name</label> - <input type="text" - id="txt:studyfullname" - name="studyfullname" - placeholder="Longer name of the study. (Optional)" - maxlength="100" - class="form-control" /> - <span class="form-text text-muted" id="help-study-full-name"> - Provide a longer, more descriptive name for the study. This is optional - and you can leave it blank. - </span> - </div> - - <div class="form-group"> - <label for="txt:studyshortname" class="form-label">Short Study Name</label> - <input type="text" - id="txt:studyshortname" - name="studyshortname" - placeholder="Shorter name of the study. (Optional)" - maxlength="100" - class="form-control" /> - <span class="form-text text-muted" id="help-study-short-name"> - Provide a shorter name for the study. This is optional and you can leave - it blank. - </span> - </div> - - <button type="submit" class="btn btn-primary">create study</button> - </form> -</div> - -{%endblock%} |