aboutsummaryrefslogtreecommitdiff
path: root/uploader/templates/populations/create-population.html
diff options
context:
space:
mode:
Diffstat (limited to 'uploader/templates/populations/create-population.html')
-rw-r--r--uploader/templates/populations/create-population.html40
1 files changed, 37 insertions, 3 deletions
diff --git a/uploader/templates/populations/create-population.html b/uploader/templates/populations/create-population.html
index b57afba..c0c4f45 100644
--- a/uploader/templates/populations/create-population.html
+++ b/uploader/templates/populations/create-population.html
@@ -37,12 +37,15 @@
<div class="row">
<form method="POST"
action="{{url_for('species.populations.create_population',
- species_id=species.SpeciesId)}}">
+ species_id=species.SpeciesId,
+ return_to=return_to)}}">
<legend>Create Population</legend>
{{flash_all_messages()}}
+ <input type="hidden" name="return_to" value="{{return_to}}">
+
<div {%if errors.population_fullname%}
class="form-group has-error"
{%else%}
@@ -107,7 +110,13 @@
value="{{error_values.population_code or ''}}"
class="form-control" />
<small class="form-text text-muted">
- … document what this field is for …
+ <p class="form-text text-muted">
+ This is a 3-character code for your population, that is prepended to
+ the phenotype identifiers. e.g. For the "BXD Family" population, the
+ code is "BXD" and therefore, the phenotype identifiers for the
+ population look like the following examples: <em>BXD_10148</em>,
+ <em>BXD_10180</em>, <em>BXD_10197</em>, etc.
+ </p>
</small>
</div>
@@ -159,7 +168,10 @@
{%endfor%}
</select>
<small class="form-text text-muted">
- <p>… provide some documentation on what this field does …</p>
+ <p>
+ This is a rough grouping of the populations in GeneNetwork into lists
+ of common types of populations.
+ </p>
</small>
</div>
@@ -207,6 +219,28 @@
{%endif%}>{{gtype}}</option>
{%endfor%}
</select>
+ <small class="form-text text-muted text-danger">
+ <p>
+ <span class="glyphicon glyphicon-exclamation-sign"></span>
+ This might be a poorly named field.
+ </p>
+ <p>
+ It probably has more to do with the mating crosses/crossings used to
+ produce the individuals in the population. I am no biologist, however,
+ and I'm leaving this here to remind myself to confirm this.
+ </p>
+ <p>
+ I still don't know what riset is.<br />
+ … probably something to do with Recombinant Inbred Strains
+ </p>
+ <p>
+ Possible resources for this:
+ <ul>
+ <li>https://www.informatics.jax.org/silver/chapters/3-2.shtml</li>
+ <li>https://www.informatics.jax.org/silver/chapters/9-2.shtml</li>
+ </ul>
+ </p>
+ </small>
</div>
<div class="form-group">