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+{%extends "phenotypes/base.html"%}
+{%from "flash_messages.html" import flash_all_messages%}
+{%from "populations/macro-display-population-card.html" import display_population_card%}
+
+{%block title%}Phenotypes{%endblock%}
+
+{%block pagetitle%}Phenotypes{%endblock%}
+
+{%block lvl4_breadcrumbs%}
+<li {%if activelink=="edit-phenotype"%}
+ class="breadcrumb-item active"
+ {%else%}
+ class="breadcrumb-item"
+ {%endif%}>
+ <a href="{{url_for('species.populations.phenotypes.edit_phenotype_data',
+ species_id=species.SpeciesId,
+ population_id=population.Id,
+ dataset_id=dataset.Id,
+ xref_id=xref_id)}}">View Datasets</a>
+</li>
+{%endblock%}
+
+{%block contents%}
+{{flash_all_messages()}}
+
+<div class="row">
+ <h2 class="heading">edit phenotype data</h2>
+ <p>The two (2) forms provided in this page help you update the data for the
+ phenotypes, and the publication information for the phenotype,
+ respectively.</p>
+</div>
+
+<div class="row">
+ <h3 class="subheading">phenotype data</h3>
+ <form id="frm-edit-phenotype-data">
+ <div style="max-height: 23.37em;overflow-y: scroll;">
+ <table class="table table-striped table-responsive table-form-table">
+ <thead style="position: sticky; top: 0;">
+ <tr>
+ <th>#</th>
+ <th>Sample</th>
+ <th>Value</th>
+ {%if population.Family in families_with_se_and_n%}
+ <th>Standard-Error</th>
+ <th>Number of Samples</th>
+ {%endif%}
+ </tr>
+ </thead>
+
+ <tbody>
+ {%for item in phenotype.data%}
+ <tr>
+ <td>{{loop.index}}</td>
+ <td>{{item.StrainName}}</td>
+ <td>
+ <input type="text"
+ name="value::{{item.DataId}}::{{item.StrainId}}"
+ value="{{item.value}}"
+ data-original-value="{{item.value}}"
+ class="form-control" /></td>
+ {%if population.Family in families_with_se_and_n%}
+ <td>
+ <input type="text"
+ name="se::{{item.DataId}}::{{item.StrainId}}"
+ value="{{item.error or ''}}"
+ data-original-value="{{item.error or ''}}"
+ class="form-control" /></td>
+ <td><input type="text"
+ name="n::{{item.DataId}}::{{item.StrainId}}"
+ value="{{item.count or ''}}"
+ data-original-value="{{item.count or "-"}}"
+ class="form-control" /></td>
+ {%endif%}
+ </tr>
+ {%endfor%}
+ </tbody>
+ </table>
+ </div>
+ <div class="form-group">
+ <input type="submit"
+ name="submit"
+ class="btn btn-primary not-implemented"
+ value="update data" />
+ </div>
+ </form>
+</div>
+
+<div class="row">
+ <h3 class="subheading">publication information</h3>
+ <p>Use the form below to update the publication information for this
+ phenotype.</p>
+ <form id="frm-edit-phenotype-pub-data"
+ method="POST"
+ action="#">
+ <div class="form-group">
+ <label for="txt-pubmed-id" class="form-label">Pubmed ID</label>
+ <input id="txt-pubmed-id" name="pubmed-id" type="text"
+ class="form-control" />
+ <span class="form-text text-muted">
+ Enter your publication's PubMed ID.
+ </span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-authors" class="form-label">Authors</label>
+ <input id="txt-publication-authors" name="publication-authors"
+ type="text" class="form-control" />
+ <span class="form-text text-muted">
+ Enter the authors.</span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-title" class="form-label">
+ Publication Title</label>
+ <input id="txt-publication-title" name="publication-title" type="text"
+ class="form-control" />
+ <span class="form-text text-muted">
+ Enter your publication's title.</span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-abstract" class="form-label">
+ Publication Abstract</label>
+ <textarea id="txt-publication-abstract" name="publication-abstract"
+ class="form-control" rows="10"></textarea>
+ <span class="form-text text-muted">
+ Enter the abstract for your publication.</span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-journal" class="form-label">Journal</label>
+ <input id="txt-publication-journal" name="journal" type="text"
+ class="form-control" />
+ <span class="form-text text-muted">
+ Enter the name of the journal where your work was published.</span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-volume" class="form-label">Volume</label>
+ <input id="txt-publication-volume" name="publication-volume" type="text"
+ class="form-control" />
+ <span class="form-text text-muted">
+ Enter the volume in the following format &hellip;</span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-pages" class="form-label">Pages</label>
+ <input id="txt-publication-pages" name="publication-pages" type="text"
+ class="form-control" />
+ <span class="form-text text-muted">
+ Enter the journal volume where your work was published.</span>
+ </div>
+
+ <div class="form-group">
+ <label for="select-publication-month" class="form-label">
+ Publication Month</label>
+ <select id="select-publication-month" name="publication-month"
+ class="form-control">
+ {%for month in monthnames%}
+ <option value="{{month | lower}}"
+ {%if current_month | lower == month | lower%}
+ selected="selected"
+ {%endif%}>{{month | capitalize}}</option>
+ {%endfor%}
+ </select>
+ <span class="form-text text-muted">
+ Select the month when the work was published.
+ <span class="text-danger">
+ This cannot be before, say 1600 and cannot be in the future!</span></span>
+ </div>
+
+ <div class="form-group">
+ <label for="txt-publication-year" class="form-label">Publication Year</label>
+ <input id="txt-publication-year" name="publication-year" type="text"
+ class="form-control" value="{{current_year}}" />
+ <span class="form-text text-muted">
+ Enter the year your work was published.
+ <span class="text-danger">
+ This cannot be before, say 1600 and cannot be in the future!</span>
+ </span>
+ </div>
+ <div class="form-group">
+ <input type="submit"
+ name="submit"
+ class="btn btn-primary not-implemented"
+ value="update publication" />
+ </div>
+ </form>
+</div>
+
+{%endblock%}
+
+{%block sidebarcontents%}
+{{display_population_card(species, population)}}
+{%endblock%}