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-rw-r--r--uploader/phenotypes/views.py29
1 files changed, 28 insertions, 1 deletions
diff --git a/uploader/phenotypes/views.py b/uploader/phenotypes/views.py
index 2f6e926..a50a8e7 100644
--- a/uploader/phenotypes/views.py
+++ b/uploader/phenotypes/views.py
@@ -920,7 +920,8 @@ def edit_download_phenotype_data(# pylint: disable=[unused-argument]
"Pre_publication_abbreviation",
"Pre_publication_description",
"Original_description",
- "Post_publication_abbreviation"
+ "Post_publication_abbreviation",
+ "PubMed_ID"
] + samples_list,
dialect="excel-tab")
writer.writeheader()
@@ -932,3 +933,29 @@ def edit_download_phenotype_data(# pylint: disable=[unused-argument]
mimetype="text/csv",
as_attachment=True,
download_name=secure_filename(f"{dataset['Name']}_data"))
+
+
+@phenotypesbp.route(
+ "<int:species_id>/populations/<int:population_id>/phenotypes/datasets"
+ "/<int:dataset_id>/edit-upload",
+ methods=["GET", "POST"])
+@require_login
+@with_dataset(
+ species_redirect_uri="species.populations.phenotypes.index",
+ population_redirect_uri="species.populations.phenotypes.select_population",
+ redirect_uri="species.populations.phenotypes.list_datasets")
+def edit_upload_phenotype_data(# pylint: disable=[unused-argument]
+ species: dict,
+ population: dict,
+ dataset: dict,
+ **kwargs
+):
+ if request.method == "GET":
+ return render_template(
+ "phenotypes/bulk-edit-upload.html",
+ species=species,
+ population=population,
+ dataset=dataset,
+ activelink="edit-phenotype")
+
+ return "NOT Implemented: Would do actual edit."