diff options
Diffstat (limited to 'tests/r_qtl/test_r_qtl2_pheno.py')
-rw-r--r-- | tests/r_qtl/test_r_qtl2_pheno.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/tests/r_qtl/test_r_qtl2_pheno.py b/tests/r_qtl/test_r_qtl2_pheno.py index 554d9c8..46be469 100644 --- a/tests/r_qtl/test_r_qtl2_pheno.py +++ b/tests/r_qtl/test_r_qtl2_pheno.py @@ -29,5 +29,5 @@ def test_parse_pheno_files(filepath, expected): THEN: verify the parsed data is as expected """ with ZipFile(Path(filepath).absolute(), "r") as zfile: - assert tuple( - rqtl2.phenotype_data(zfile, rqtl2.control_data(zfile))) == expected + cdata = rqtl2.control_data(zfile) + assert tuple(rqtl2.file_data(zfile, "pheno", cdata)) == expected |