diff options
Diffstat (limited to 'tests/qc/test_parsing.py')
| -rw-r--r-- | tests/qc/test_parsing.py | 14 |
1 files changed, 7 insertions, 7 deletions
diff --git a/tests/qc/test_parsing.py b/tests/qc/test_parsing.py index 6c784d5..41739ad 100644 --- a/tests/qc/test_parsing.py +++ b/tests/qc/test_parsing.py @@ -22,25 +22,25 @@ def test_parse_file_fails_with_wrong_filetype_declaration(filepath, filetype, st @pytest.mark.parametrize( "filepath,filetype", - (("tests/test_data/average_crlf.tsv", FileType.AVERAGE), - ("tests/test_data/average.tsv", FileType.AVERAGE), - ("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR))) + (("tests/test_data/no_data_errors.tsv", FileType.AVERAGE),)) def test_parse_file_passes_with_valid_files(filepath, filetype, strains): """Check that parsing succeeds with valid files""" for line in parse_file(filepath, filetype, strains): assert bool(line) +@pytest.mark.slow @pytest.mark.parametrize( "filepath,filetype", - (("tests/test_data/average_large.tsv", FileType.AVERAGE), - ("tests/test_data/average.tsv", FileType.AVERAGE), - ("tests/test_data/standarderror.tsv", FileType.STANDARD_ERROR))) + (("tests/test_data/average_large_no_errors.tsv", FileType.AVERAGE), + # ("tests/test_data/average_no_errors.tsv", FileType.AVERAGE), + # ("tests/test_data/standarderror_no_errors.tsv", FileType.STANDARD_ERROR), + )) def test_parse_file_works_with_large_files(filepath, filetype, strains): """Check that parsing succeeds even with large files.""" for line in parse_file(filepath, filetype, strains): assert bool(line) - +@pytest.mark.slow @pytest.mark.parametrize( "filepath,filetype", (("tests/test_data/average_error_at_end_200MB.tsv", FileType.AVERAGE), |