diff options
Diffstat (limited to 'scripts')
| -rw-r--r-- | scripts/rqtl2/install_genotypes.py | 2 | ||||
| -rw-r--r-- | scripts/rqtl2/install_phenos.py | 2 |
2 files changed, 2 insertions, 2 deletions
diff --git a/scripts/rqtl2/install_genotypes.py b/scripts/rqtl2/install_genotypes.py index 709fe0f..d0731a2 100644 --- a/scripts/rqtl2/install_genotypes.py +++ b/scripts/rqtl2/install_genotypes.py @@ -176,7 +176,7 @@ def install_genotypes(#pylint: disable=[too-many-arguments, too-many-locals] cdata = rqtl2.control_data(zfile) genotypes = rqtl2.genotype_data(zfile) while True: - batch = tuple(take(genotypes, 5000)) + batch = tuple(take(genotypes, 1000)) if len(batch) == 0: logger.info("Loading Genotypes complete!") logger.info( diff --git a/scripts/rqtl2/install_phenos.py b/scripts/rqtl2/install_phenos.py index 95745d7..b5cab8e 100644 --- a/scripts/rqtl2/install_phenos.py +++ b/scripts/rqtl2/install_phenos.py @@ -111,7 +111,7 @@ def install_pheno_files(#pylint: disable=[too-many-arguments, too-many-locals] phenorows = 0 datarows = 0 while True: - batch = tuple(take(phenodata, 5000)) + batch = tuple(take(phenodata, 1000)) if len(batch) == 0: logger.info("pheno data loading complete!") logger.info("Inserted a total of %s new ProbeSets and %s " |