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-rw-r--r--scripts/rqtl2/cli_parser.py13
1 files changed, 13 insertions, 0 deletions
diff --git a/scripts/rqtl2/cli_parser.py b/scripts/rqtl2/cli_parser.py
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+++ b/scripts/rqtl2/cli_parser.py
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+"""Utilities for CLI parsers specific to R/qtl2 parsing scripts."""
+from pathlib import Path
+from argparse import ArgumentParser
+
+def add_common_arguments(parser: ArgumentParser) -> ArgumentParser:
+ """Add common arguments to the CLI parser."""
+ parser.add_argument("datasetid",
+ type=int,
+ help="The dataset to which the data belongs.")
+ parser.add_argument("rqtl2bundle",
+ type=Path,
+ help="Path to R/qtl2 bundle zip file.")
+ return parser