diff options
Diffstat (limited to 'r_qtl/r_qtl2_qc.py')
-rw-r--r-- | r_qtl/r_qtl2_qc.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/r_qtl/r_qtl2_qc.py b/r_qtl/r_qtl2_qc.py index be1eac4..7e93d23 100644 --- a/r_qtl/r_qtl2_qc.py +++ b/r_qtl/r_qtl2_qc.py @@ -3,8 +3,8 @@ from zipfile import ZipFile from functools import reduce, partial from typing import Union, Iterator, Optional, Callable -from r_qtl import errors as rqe from r_qtl import r_qtl2 as rqtl2 +from r_qtl import exceptions as rqe from r_qtl.r_qtl2 import FILE_TYPES from r_qtl.fileerrors import MissingFile @@ -59,7 +59,7 @@ def validate_bundle(zfile: ZipFile): """Ensure the R/qtl2 bundle is valid.""" missing = missing_files(zfile) if len(missing) > 0: - raise rqe.MissingFileError( + raise rqe.MissingFileException( "The following files do not exist in the bundle: " + ", ".join(mfile[1] for mfile in missing)) @@ -111,6 +111,6 @@ def retrieve_errors(zfile: ZipFile, filetype: str, checkers: tuple[Callable]) -> if value is not None: for checker in checkers: yield checker(lineno=lineno, field=field, value=value) - except rqe.MissingFileError: + except rqe.MissingFileException: fname = cdata.get(filetype) yield MissingFile(filetype, fname, f"Missing '{filetype}' file '{fname}'.") |