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-rw-r--r--qc_app/entry.py12
1 files changed, 8 insertions, 4 deletions
diff --git a/qc_app/entry.py b/qc_app/entry.py
index bf78037..0cd34c5 100644
--- a/qc_app/entry.py
+++ b/qc_app/entry.py
@@ -14,7 +14,8 @@ from flask import (
render_template,
current_app as app)
-from .dbinsert import species
+from qc_app.db import species
+from qc_app.db_utils import with_db_connection
entrybp = Blueprint("entry", __name__)
@@ -78,14 +79,16 @@ def zip_file_errors(filepath, upload_dir) -> Tuple[str, ...]:
def upload_file():
"""Enables uploading the files"""
if request.method == "GET":
- return render_template("index.html", species = species())
+ return render_template(
+ "index.html", species=with_db_connection(species))
upload_dir = app.config["UPLOAD_FOLDER"]
request_errors = errors(request)
if request_errors:
for error in request_errors:
flash(error, "alert-error")
- return render_template("index.html", species = species()), 400
+ return render_template(
+ "index.html", species=with_db_connection(species)), 400
filename = secure_filename(request.files["qc_text_file"].filename)
if not os.path.exists(upload_dir):
@@ -98,7 +101,8 @@ def upload_file():
if zip_errors:
for error in zip_errors:
flash(error, "alert-error")
- return render_template("index.html", species = species()), 400
+ return render_template(
+ "index.html", species=with_db_connection(species)), 400
return redirect(url_for(
"parse.parse", filename=filename,