diff options
Diffstat (limited to 'qc_app/db/datasets.py')
-rw-r--r-- | qc_app/db/datasets.py | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/qc_app/db/datasets.py b/qc_app/db/datasets.py index 5f6a2d5..5816146 100644 --- a/qc_app/db/datasets.py +++ b/qc_app/db/datasets.py @@ -85,3 +85,36 @@ def probeset_create_study(conn: mdb.Connection,#pylint: disable=[too-many-argume cursor.execute("UPDATE ProbeFreeze SET ProbeFreezeId=%s", (studyid,)) return {**studydata, "studyid": studyid} + +def probeset_create_dataset(conn: mdb.Connection,#pylint: disable=[too-many-arguments] + studyid: int, + averageid: int, + datasetname: str, + datasetfullname: str, + datasetshortname: str="", + public: bool = True, + datascale="log2") -> dict: + """Create a new ProbeSet dataset.""" + with conn.cursor(cursorclass=DictCursor) as cursor: + dataset = { + "studyid": studyid, + "averageid": averageid, + "name2": datasetname, + "fname": datasetfullname, + "name": datasetshortname, + "sname": datasetshortname, + "today": date.today().isoformat(), + "public": 2 if public else 0, + "datascale": datascale + } + cursor.execute( + """ + insert into ProbeSetFreeze( + ProbeFreezeId, AvgId, Name, Name2, FullName, ShortName, + CreateTime, public, DataScale) + VALUES( + %(studyid)s, %(averageid)s, %(name)s, %(name2)s, %(fname)s, + %(sname)s, %(today)s, %(public)s, %(datascale)s) + """, + dataset) + return {**dataset, "datasetid": cursor.lastrowid} |