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Diffstat (limited to 'README.org')
-rw-r--r-- | README.org | 20 |
1 files changed, 20 insertions, 0 deletions
@@ -24,3 +24,23 @@ following criteria: - - there must be a number to the left side of the dot (e.g. 0.55555 is allowed but .55555 is not). - check line endings to make sure they are Unix and not DOS - check strain headers against a source of truth (see strains.csv) + +** Development + +For reproducibility, this project is developed using guix. + +To launch a guix shell for development, do: + +#+BEGIN_SRC shell + guix shell --container --network --manifest=manifest.scm +#+END_SRC + +to get an environment that is isolated from the rest of your system. + +*** Tests + +Run tests with: + +#+BEGIN_SRC shell + pytest +#+END_SRC |