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| author | Frederick Muriuki Muriithi | 2025-06-10 15:58:51 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-06-10 17:19:44 -0500 |
| commit | 1c93d2597e16d9828760e10aeb056fa10fd4fcf9 (patch) | |
| tree | b4f02d3269e5772572376f6acf1d6cfbea1ae46b /uploader | |
| parent | df9fe5b9d00753190b3d2ee487f4faee63fca57d (diff) | |
| download | gn-uploader-1c93d2597e16d9828760e10aeb056fa10fd4fcf9.tar.gz | |
Bug: Fix logging.
Diffstat (limited to 'uploader')
| -rw-r--r-- | uploader/phenotypes/models.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/uploader/phenotypes/models.py b/uploader/phenotypes/models.py index 20b8e77..a6ee694 100644 --- a/uploader/phenotypes/models.py +++ b/uploader/phenotypes/models.py @@ -374,14 +374,14 @@ def quick_save_phenotypes_data( prefix=f"{table}_data", mode="wt", dir=tmpdir) as tmpfile, conn.cursor(cursorclass=DictCursor) as cursor): _count = 0 - console.debug("Write data rows to text file.") + logger.debug("Write data rows to text file.") for row in dataitems: tmpfile.write( f'{row["data_id"]}\t{row["sample_id"]}\t{row["value"]}\n') _count = _count + 1 tmpfile.flush() - console.debug("Load text file into database (table: %s)", + logger.debug("Load text file into database (table: %s)", _table_details["table"]) cursor.execute( f"LOAD DATA LOCAL INFILE '{tmpfile.name}' " |