Rename module: qc_app --> uploader

1 files changed, 108 insertions, 0 deletions

diff --git a/uploader/templates/select_study.html b/uploader/templates/select_study.html
new file mode 100644
index 0000000..648ad4c
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+++ b/uploader/templates/select_study.html
@@ -0,0 +1,108 @@
+{%extends "base.html"%}
+{%from "dbupdate_hidden_fields.html" import hidden_fields%}
+
+{%block title%}Select Dataset{%endblock%}
+
+{%block css%}
+<link rel="stylesheet" href="/static/css/two-column-with-separator.css" />
+{%endblock%}
+
+{%block contents%}
+<h2 class="heading">{{filename}}: select study</h2>
+
+<div class="row">
+  <form method="POST" action="{{url_for('dbinsert.select_dataset')}}"
+	id="select-platform-form" data-genechips="{{genechips_data}}"
+	class="two-col-sep-col1">
+    <legend class="heading">Select from existing study</legend>
+    {{hidden_fields(filename, filetype, species=species, genechipid=genechipid,
+    totallines=totallines)}}
+
+    <div class="form-group">
+      <label class="form-label" for="study">study:</label>
+      <select id="study" name="studyid" class="form-control">
+	{%for study in studies:%}
+	<option value="{{study['Id']}}">{{study["Name"]}}</option>
+	{%endfor%}
+      </select>
+    </div>
+
+    <button type="submit"
+	    class="btn btn-primary"
+	    {%if studies | length == 0:%}
+	    disabled="disabled"
+	    {%endif%} />submit selected study</button>
+</form>
+</div>
+
+<div class="row">
+  <p class="two-col-sep-separator">OR</p>
+</div>
+
+<div class="row">
+  <form method="POST" action="{{url_for('dbinsert.create_study')}}"
+	id="select-platform-form" data-genechips="{{genechips_data}}"
+	class="two-col-sep-col2">
+    {%with messages = get_flashed_messages(with_categories=true)%}
+    {%if messages:%}
+    <ul>
+      {%for category, message in messages:%}
+      <li class="{{category}}">{{message}}</li>
+      {%endfor%}
+    </ul>
+    {%endif%}
+    {%endwith%}
+    <legend class="heading">Create new study</legend>
+    {{hidden_fields(filename, filetype, species=species, genechipid=genechipid,
+    totallines=totallines)}}
+
+    <div class="form-group">
+      <label class="form-label" for="studyname">name:</label>
+      <input type="text" id="studyname" name="studyname" class="form-control"
+	     required="required"
+	     {%if studyname:%}
+	     value="{{studyname}}"
+	     {%endif%} />
+    </div>
+
+    <div class="form-group">
+      <label class="form-label" for="group">group:</label>
+      <select id="group" name="inbredsetid" class="form-control"
+	      required="required">
+	<option value="">Select group</option>
+	{%for family in groups:%}
+	<optgroup label="{{family}}">
+	  {%for group in groups[family]:%}
+	  <option value="{{group['InbredSetId']}}"
+		  {%if group["InbredSetId"] == selected_group:%}
+		  selected="selected"
+		  {%endif%}>
+	    {{group["FullName"]}}
+	  </option>
+	  {%endfor%}
+	</optgroup>
+	{%endfor%}
+      </select>
+    </div>
+
+    <div class="form-group">
+      <label class="form-label" for="tissue">tissue:</label>
+      <select id="tissue" name="tissueid" class="form-control"
+	      required="required">
+	<option value="">Select type</option>
+	{%for tissue in tissues:%}
+	<option value="{{tissue['TissueId']}}"
+		{%if tissue["TissueId"] == selected_tissue:%}
+		selected="selected"
+		{%endif%}>
+	  {{tissue["Name"]}}
+	</option>
+	{%endfor%}
+      </select>
+    </div>
+
+    <button type="submit" class="btn btn-primary">create study</button>
+  </form>
+</div>
+
+{%endblock%}