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authorFrederick Muriuki Muriithi2024-09-03 14:55:48 -0500
committerFrederick Muriuki Muriithi2024-09-03 16:51:26 -0500
commit61688c00e8734adee4d825571a9c43d926dca001 (patch)
tree0a53c7eff5ec2bb1376be2eb2bdd2333c606ba11 /uploader/expression_data
parent2876fe6251bd4dfceef06f638ee74c2728ad1207 (diff)
downloadgn-uploader-61688c00e8734adee4d825571a9c43d926dca001.tar.gz
Initialise the populations package and update references.
Diffstat (limited to 'uploader/expression_data')
-rw-r--r--uploader/expression_data/rqtl2.py8
-rw-r--r--uploader/expression_data/samples.py9
2 files changed, 6 insertions, 11 deletions
diff --git a/uploader/expression_data/rqtl2.py b/uploader/expression_data/rqtl2.py
index 975fc1f..a855699 100644
--- a/uploader/expression_data/rqtl2.py
+++ b/uploader/expression_data/rqtl2.py
@@ -36,11 +36,9 @@ from uploader.authorisation import require_login
from uploader.db.platforms import platform_by_id, platforms_by_species
from uploader.db.averaging import averaging_methods, averaging_method_by_id
from uploader.db.tissues import all_tissues, tissue_by_id, create_new_tissue
-from uploader.db import (
- species_by_id,
- save_population,
- populations_by_species,
- population_by_species_and_id,)
+from uploader.population.models import (save_population,
+ populations_by_species,
+ population_by_species_and_id)
from uploader.species.models import species_by_id
from uploader.db.datasets import (
geno_dataset_by_id,
diff --git a/uploader/expression_data/samples.py b/uploader/expression_data/samples.py
index 0715d14..d430aa9 100644
--- a/uploader/expression_data/samples.py
+++ b/uploader/expression_data/samples.py
@@ -28,13 +28,10 @@ from uploader.db_utils import (
with_db_connection,
database_connection,
with_redis_connection)
-from uploader.db import (
- species_by_id,
- save_population,
- population_by_id,
- populations_by_species,
- species as fetch_species)
from uploader.species.models import species_by_id, all_species as fetch_species
+from uploader.population.models import(save_population,
+ population_by_id,
+ populations_by_species)
samples = Blueprint("samples", __name__)