Rename test module

While 'covar' files can contain cross information, they do not have
to, and therefore, we need to test for cross information separately.

1 files changed, 0 insertions, 36 deletions

diff --git a/tests/r_qtl/test_r_qtl2_cross_information.py b/tests/r_qtl/test_r_qtl2_cross_information.py
deleted file mode 100644
index f004fd3..0000000
--- a/tests/r_qtl/test_r_qtl2_cross_information.py
+++ /dev/null
@@ -1,36 +0,0 @@
-"""Test parsing of cross-information files."""
-from pathlib import Path
-
-import pytest
-from zipfile import ZipFile
-
-from r_qtl import r_qtl2 as rqtl2
-
-@pytest.mark.unit_test
-@pytest.mark.parametrize(
-    "filepath,expected",
-    (("tests/r_qtl/test_files/test_covar.zip",
-      ({"id": "1", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "2", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "3", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "146", "sex": "f", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "147", "sex": "f", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "148", "sex": "f", "cross_direction": "(BxS)x(BxS)"})),
-     ("tests/r_qtl/test_files/test_covar_transposed.zip",
-      ({"id": "1", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "2", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "3", "sex": "m", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "146", "sex": "f", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "147", "sex": "f", "cross_direction": "(BxS)x(BxS)"},
-       {"id": "148", "sex": "f", "cross_direction": "(BxS)x(BxS)"})),
-     ))
-def test_parse_covar_files(filepath, expected):
-    """Test parsing of 'covar' files from the R/qtl2 bundle.
-
-    GIVEN: path to a R/qtl2 bundle
-    WHEN: the 'covar' file is parsed
-    THEN: verify the parsed data is as expected
-    """
-    with ZipFile(Path(filepath).absolute(), "r") as zfile:
-        cdata = rqtl2.control_data(zfile)
-        assert tuple(rqtl2.file_data(zfile, "covar", cdata)) == expected