diff options
| author | Frederick Muriuki Muriithi | 2024-02-20 05:16:45 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-02-20 05:16:45 +0300 |
| commit | b1483d974d30d162e12557f55e856ec7d79bad2e (patch) | |
| tree | 0711530c5f06e2485edf4e768187e3df79faad55 /tests/qc/test_checks.py | |
| parent | 8e692b0c372db3999dfc3989f361676c579fb9cd (diff) | |
| download | gn-uploader-b1483d974d30d162e12557f55e856ec7d79bad2e.tar.gz | |
Read each file separately
Provide the function 'read_file_data' in the 'r_qtl.r_qtl2' module to
read each file in the bundle separately.
The function 'file_data' in the 'r_qtl.r_qtl2' module reads *ALL* the
files of a particular type (e.g. geno files) and returns a single
generator object with the data from *ALL* the files. This does not
render itself very useful for error checking.
We needed a way to check for errors, and report them for each and
every file in the bundle, for easier tracking and fixing.
Diffstat (limited to 'tests/qc/test_checks.py')
0 files changed, 0 insertions, 0 deletions