Rename module: qc_app --> uploader

9 files changed, 22 insertions, 22 deletions

diff --git a/scripts/insert_data.py b/scripts/insert_data.py
index 1465348..4b2e5f3 100644
--- a/scripts/insert_data.py
+++ b/scripts/insert_data.py
@@ -14,8 +14,8 @@ from MySQLdb.cursors import DictCursor
 from functional_tools import take
 
 from quality_control.file_utils import open_file
-from qc_app.db_utils import database_connection
-from qc_app.check_connections import check_db, check_redis
+from uploader.db_utils import database_connection
+from uploader.check_connections import check_db, check_redis
 
 # Set up logging
 stderr_handler = logging.StreamHandler(stream=sys.stderr)
diff --git a/scripts/insert_samples.py b/scripts/insert_samples.py
index 8431462..87f29dc 100644
--- a/scripts/insert_samples.py
+++ b/scripts/insert_samples.py
@@ -7,10 +7,10 @@ import argparse
 import MySQLdb as mdb
 from redis import Redis
 
-from qc_app.db_utils import database_connection
-from qc_app.check_connections import check_db, check_redis
-from qc_app.db import species_by_id, population_by_id
-from qc_app.samples import (
+from uploader.db_utils import database_connection
+from uploader.check_connections import check_db, check_redis
+from uploader.db import species_by_id, population_by_id
+from uploader.samples import (
     save_samples_data,
     read_samples_file,
     cross_reference_samples)
diff --git a/scripts/process_rqtl2_bundle.py b/scripts/process_rqtl2_bundle.py
index 4da3936..a7e169d 100644
--- a/scripts/process_rqtl2_bundle.py
+++ b/scripts/process_rqtl2_bundle.py
@@ -17,9 +17,9 @@ import r_qtl.errors as rqe
 import r_qtl.r_qtl2 as rqtl2
 import r_qtl.r_qtl2_qc as rqc
 
-from qc_app import jobs
-from qc_app.db_utils import database_connection
-from qc_app.check_connections import check_db, check_redis
+from uploader import jobs
+from uploader.db_utils import database_connection
+from uploader.check_connections import check_db, check_redis
 
 from scripts.cli_parser import init_cli_parser
 from scripts.redis_logger import setup_redis_logger
diff --git a/scripts/qc.py b/scripts/qc.py
index e8573a9..6de051f 100644
--- a/scripts/qc.py
+++ b/scripts/qc.py
@@ -11,7 +11,7 @@ from quality_control.utils import make_progress_calculator
 from quality_control.errors import InvalidValue, DuplicateHeading
 from quality_control.parsing import FileType, strain_names, collect_errors
 
-from qc_app.db_utils import database_connection
+from uploader.db_utils import database_connection
 
 from .cli_parser import init_cli_parser
 
diff --git a/scripts/qc_on_rqtl2_bundle.py b/scripts/qc_on_rqtl2_bundle.py
index 40809b7..150fbce 100644
--- a/scripts/qc_on_rqtl2_bundle.py
+++ b/scripts/qc_on_rqtl2_bundle.py
@@ -16,9 +16,9 @@ from redis import Redis
 from quality_control.errors import InvalidValue
 from quality_control.checks import decimal_points_error
 
-from qc_app import jobs
-from qc_app.db_utils import database_connection
-from qc_app.check_connections import check_db, check_redis
+from uploader import jobs
+from uploader.db_utils import database_connection
+from uploader.check_connections import check_db, check_redis
 
 from r_qtl import errors as rqe
 from r_qtl import r_qtl2 as rqtl2
diff --git a/scripts/qcapp_wsgi.py b/scripts/qcapp_wsgi.py
index 349c006..fe77031 100644
--- a/scripts/qcapp_wsgi.py
+++ b/scripts/qcapp_wsgi.py
@@ -5,8 +5,8 @@ from logging import getLogger, StreamHandler
 
 from flask import Flask
 
-from qc_app import create_app
-from qc_app.check_connections import check_db, check_redis
+from uploader import create_app
+from uploader.check_connections import check_db, check_redis
 
 def setup_logging(appl: Flask) -> Flask:
     """Setup appropriate logging paradigm depending on environment."""
diff --git a/scripts/rqtl2/entry.py b/scripts/rqtl2/entry.py
index 93fc130..b7fb68e 100644
--- a/scripts/rqtl2/entry.py
+++ b/scripts/rqtl2/entry.py
@@ -6,9 +6,9 @@ from argparse import Namespace
 from redis import Redis
 from MySQLdb import Connection
 
-from qc_app import jobs
-from qc_app.db_utils import database_connection
-from qc_app.check_connections import check_db, check_redis
+from uploader import jobs
+from uploader.db_utils import database_connection
+from uploader.check_connections import check_db, check_redis
 
 from scripts.redis_logger import setup_redis_logger
 
diff --git a/scripts/validate_file.py b/scripts/validate_file.py
index 0028795..a40d7e7 100644
--- a/scripts/validate_file.py
+++ b/scripts/validate_file.py
@@ -12,8 +12,8 @@ from redis.exceptions import ConnectionError # pylint: disable=[redefined-builti
 from quality_control.utils import make_progress_calculator
 from quality_control.parsing import FileType, strain_names, collect_errors
 
-from qc_app import jobs
-from qc_app.db_utils import database_connection
+from uploader import jobs
+from uploader.db_utils import database_connection
 
 from .cli_parser import init_cli_parser
 from .qc import add_file_validation_arguments
diff --git a/scripts/worker.py b/scripts/worker.py
index 0eb9ea5..91b0332 100644
--- a/scripts/worker.py
+++ b/scripts/worker.py
@@ -11,8 +11,8 @@ from tempfile import TemporaryDirectory
 
 from redis import Redis
 
-from qc_app import jobs
-from qc_app.check_connections import check_redis
+from uploader import jobs
+from uploader.check_connections import check_redis
 
 def parse_args():
     "Parse the command-line arguments"