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authorFrederick Muriuki Muriithi2024-01-16 06:29:13 +0300
committerFrederick Muriuki Muriithi2024-01-16 06:52:28 +0300
commitfc27d0447c189bfd9222c7e8ccc14074cfd6adce (patch)
treefeb36cc9c2fec2461af8a2b621429bbac70c8e0b /scripts/rqtl2/__init__.py
parentb7942002b2f40af965bd0ef9c9673fbaeb28a9e1 (diff)
downloadgn-uploader-fc27d0447c189bfd9222c7e8ccc14074cfd6adce.tar.gz
Provide defaults for various control variables
`na.strings` has a default value of "NA" as stated in https://kbroman.org/qtl2/assets/vignettes/input_files.html#CSV_files quote: > Missing value codes will be specified in the control file (as > na.strings, with default value "NA") and will apply across all > files, so a missing value code for one file cannot be an allowed > value in another file. for `comment.char` > The CSV files can include a header with a set of comment lines > initiated by a value specified in the control file as comment.char > (with default value "#"). for `sep`: The default separator is expected to be the comma, as stated in https://kbroman.org/qtl2/assets/vignettes/input_files.html#field-separator quote: > If the data files use a separator other than a comma ...
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