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authorFrederick Muriuki Muriithi2022-07-08 07:32:58 +0300
committerFrederick Muriuki Muriithi2022-07-19 04:46:09 +0300
commit7a3a54ec40fac9071a513487602957f8418f163e (patch)
tree4acec2accb54bcb1c2f9c25c39d8f82c4b81be20 /qc_app/templates
parenta21e759ac7a6b72a3d02814c2bfb26bc4f49204c (diff)
downloadgn-uploader-7a3a54ec40fac9071a513487602957f8418f163e.tar.gz
Select the platform (GeneChipId) first
Diffstat (limited to 'qc_app/templates')
-rw-r--r--qc_app/templates/parse_results.html2
-rw-r--r--qc_app/templates/select_platform.html72
2 files changed, 73 insertions, 1 deletions
diff --git a/qc_app/templates/parse_results.html b/qc_app/templates/parse_results.html
index 1a224e8..80d6a2d 100644
--- a/qc_app/templates/parse_results.html
+++ b/qc_app/templates/parse_results.html
@@ -13,7 +13,7 @@
{{errors_display(errors, "No errors found in the file", "We found the following errors")}}
{%if errors | length == 0 %}
-<form method="post" action="{{url_for('dbinsert.select_dataset')}}">
+<form method="post" action="{{url_for('dbinsert.select_platform')}}">
<input type="hidden" name="job_id" value="{{job_id}}" />
<input type="submit" value="update database" class="btn btn-main" />
</form>
diff --git a/qc_app/templates/select_platform.html b/qc_app/templates/select_platform.html
new file mode 100644
index 0000000..f8db736
--- /dev/null
+++ b/qc_app/templates/select_platform.html
@@ -0,0 +1,72 @@
+{%extends "base.html"%}
+
+{%block title%}Select Dataset{%endblock%}
+
+{%block contents%}
+<h1 class="heading">{{filename}}: select platform</h2>
+
+<form method="POST" action="{{url_for('dbinsert.select_study')}}"
+ id="select-platform-form" data-genechips="{{genechips_data}}">
+ <input type="hidden" name="filename" value="{{filename}}" />
+ <input type="hidden" name="filetype" value="{{filetype}}" />
+
+ <fieldset>
+ <label for="species" class="form-col-1">species</label>
+ <select id="species" name="species" class="form-col-2">
+ {%for row in species:%}
+ <option value="{{row['SpeciesId']}}"
+ {%if row["Name"] == default_species:%}
+ selected="selected"
+ {%endif%}>
+ {{row["MenuName"]}}
+ </option>
+ {%endfor%}
+ </select>
+ </fieldset>
+
+ <table id="genechips-table">
+ <thead>
+ <tr>
+ <th>Select</th>
+ <th>GeneChip Name</th>
+ <th>Name</th>
+ <th>GeoPlatform</th>
+ <th>GO Tree Value</th>
+ </tr>
+ </thead>
+
+ <tbody>
+ {%for chip in genechips:%}
+ <tr>
+ <td>
+ <input type="radio" name="genechipid" value="{{chip['GeneChipId']}}"
+ required="required" />
+ </td>
+ <td>{{chip["GeneChipName"]}}</td>
+ <td>{{chip["Name"]}}</td>
+ <td>{{chip["GeoPlatform"]}}</td>
+ <td>{{chip["GO_tree_value"]}}</td>
+ </tr>
+ {%else%}
+ <tr>
+ <td colspan="5">No chips found for selected species</td>
+ </tr>
+ {%endfor%}
+ </tbody>
+ </table>
+
+ <fieldset>
+ <input type="submit" class="btn btn-main form-col-2"
+ value="submit platform" />
+ </fieldset>
+</form>
+{%endblock%}
+
+{%block javascript%}
+<script type="text/javascript" src="/static/js/utils.js"></script>
+<script type="text/javascript" src="/static/js/select_platform.js"></script>
+<script type="text/javascript">
+ document.getElementById(
+ "species").addEventListener("change", update_genechips);
+</script>
+{%endblock%}