From 7a3a54ec40fac9071a513487602957f8418f163e Mon Sep 17 00:00:00 2001
From: Frederick Muriuki Muriithi
Date: Fri, 8 Jul 2022 07:32:58 +0300
Subject: Select the platform (GeneChipId) first

---
 qc_app/templates/parse_results.html   |  2 +-
 qc_app/templates/select_platform.html | 72 +++++++++++++++++++++++++++++++++++
 2 files changed, 73 insertions(+), 1 deletion(-)
 create mode 100644 qc_app/templates/select_platform.html

(limited to 'qc_app/templates')

diff --git a/qc_app/templates/parse_results.html b/qc_app/templates/parse_results.html
index 1a224e8..80d6a2d 100644
--- a/qc_app/templates/parse_results.html
+++ b/qc_app/templates/parse_results.html
@@ -13,7 +13,7 @@
 {{errors_display(errors, "No errors found in the file", "We found the following errors")}}
 
 {%if errors | length == 0 %}
-<form method="post" action="{{url_for('dbinsert.select_dataset')}}">
+<form method="post" action="{{url_for('dbinsert.select_platform')}}">
   <input type="hidden" name="job_id" value="{{job_id}}" />
   <input type="submit" value="update database" class="btn btn-main" />
 </form>
diff --git a/qc_app/templates/select_platform.html b/qc_app/templates/select_platform.html
new file mode 100644
index 0000000..f8db736
--- /dev/null
+++ b/qc_app/templates/select_platform.html
@@ -0,0 +1,72 @@
+{%extends "base.html"%}
+
+{%block title%}Select Dataset{%endblock%}
+
+{%block contents%}
+<h1 class="heading">{{filename}}: select platform</h2>
+
+<form method="POST" action="{{url_for('dbinsert.select_study')}}"
+      id="select-platform-form" data-genechips="{{genechips_data}}">
+  <input type="hidden" name="filename" value="{{filename}}" />
+  <input type="hidden" name="filetype" value="{{filetype}}" />
+
+  <fieldset>
+    <label for="species" class="form-col-1">species</label>
+    <select id="species" name="species" class="form-col-2">
+      {%for row in species:%}
+      <option value="{{row['SpeciesId']}}"
+	      {%if row["Name"] == default_species:%}
+	      selected="selected"
+	      {%endif%}>
+	{{row["MenuName"]}}
+      </option>
+      {%endfor%}
+    </select>
+  </fieldset>
+
+  <table id="genechips-table">
+    <thead>
+      <tr>
+	<th>Select</th>
+	<th>GeneChip Name</th>
+	<th>Name</th>
+	<th>GeoPlatform</th>
+	<th>GO Tree Value</th>
+      </tr>
+    </thead>
+
+    <tbody>
+      {%for chip in genechips:%}
+      <tr>
+	<td>
+	  <input type="radio" name="genechipid" value="{{chip['GeneChipId']}}"
+		 required="required" />
+	</td>
+	<td>{{chip["GeneChipName"]}}</td>
+	<td>{{chip["Name"]}}</td>
+	<td>{{chip["GeoPlatform"]}}</td>
+	<td>{{chip["GO_tree_value"]}}</td>
+      </tr>
+      {%else%}
+      <tr>
+	<td colspan="5">No chips found for selected species</td>
+      </tr>
+      {%endfor%}
+    </tbody>
+  </table>
+
+  <fieldset>
+    <input type="submit" class="btn btn-main form-col-2"
+	   value="submit platform" />
+  </fieldset>
+</form>
+{%endblock%}
+
+{%block javascript%}
+<script type="text/javascript" src="/static/js/utils.js"></script>
+<script type="text/javascript" src="/static/js/select_platform.js"></script>
+<script type="text/javascript">
+  document.getElementById(
+      "species").addEventListener("change", update_genechips);
+</script>
+{%endblock%}
-- 
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