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authorFrederick Muriuki Muriithi2024-06-12 16:38:54 -0500
committerFrederick Muriuki Muriithi2024-06-13 12:01:14 -0500
commitf726c71bf1636a838f45363d1613763a2926e34f (patch)
tree8b5e0323106026abafa5cc0385a32df9df62f9e5 /qc_app/templates/samples
parent05402410638fc7dd678a6289ccd2a9ce11acc5e7 (diff)
downloadgn-uploader-f726c71bf1636a838f45363d1613763a2926e34f.tar.gz
Update html templates to use bootstrap for styling
Diffstat (limited to 'qc_app/templates/samples')
-rw-r--r--qc_app/templates/samples/select-population.html54
-rw-r--r--qc_app/templates/samples/select-species.html15
-rw-r--r--qc_app/templates/samples/upload-samples.html132
3 files changed, 94 insertions, 107 deletions
diff --git a/qc_app/templates/samples/select-population.html b/qc_app/templates/samples/select-population.html
index 5d78826..da19ddc 100644
--- a/qc_app/templates/samples/select-population.html
+++ b/qc_app/templates/samples/select-population.html
@@ -13,33 +13,28 @@
(e.g. Inbred populations, cell tissue, etc.)</p>
</div>
-<hr />
-
<form method="POST" action="{{url_for('samples.select_population',
species_id=species.SpeciesId)}}">
<legend class="heading">select grouping/population</legend>
{{flash_messages("error-select-population")}}
<input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
- <fieldset>
- <label for="select:inbredset" class="form-col-1">grouping/population</label>
+
+ <div class="form-group">
+ <label for="select:inbredset" class="form-label">grouping/population</label>
<select id="select:inbredset"
name="inbredset_id"
required="required"
- class="form-col-2">
+ class="form-control">
<option value="">Select a grouping/population</option>
{%for pop in populations%}
<option value="{{pop.InbredSetId}}">
{{pop.InbredSetName}} ({{pop.FullName}})</option>
{%endfor%}
</select>
- </fieldset>
+ </div>
- <fieldset>
- <input type="submit"
- value="select population"
- class="btn btn-primary form-col-2" />
- </fieldset>
+ <button type="submit" class="btn btn-primary">select population</button>
</form>
<p style="color:#FE3535; padding-left:20em; font-weight:bolder;">OR</p>
@@ -50,54 +45,51 @@
{{flash_messages("error-create-population")}}
<input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
- <fieldset>
+ <div class="form-group">
<legend>mandatory</legend>
- <label for="txt:inbredset-name" class="form-col-1">name</label>
+
+ <label for="txt:inbredset-name" class="form-label">name</label>
<input id="txt:inbredset-name"
name="inbredset_name"
type="text"
required="required"
placeholder="Enter grouping/population name"
- class="form-col-2" />
+ class="form-control" />
- <label for="txt:" class="form-col-1">full name</label>
+ <label for="txt:" class="form-label">full name</label>
<input id="txt:inbredset-fullname"
name="inbredset_fullname"
type="text"
required = "required"
placeholder="Enter the grouping/population's full name"
- class="form-col-2" />
- </fieldset>
- <fieldset>
+ class="form-control" />
+ </div>
+ <div class="form-group">
<legend>Optional</legend>
- <label for="num:public" class="form-col-1">public?</label>
+ <label for="num:public" class="form-label">public?</label>
<input id="num:public"
name="public"
type="number"
min="0" max="2" value="2"
- class="form-col-2" />
+ class="form-control" />
- <label for="txt:inbredset-family" class="form-col-1">family</label>
+ <label for="txt:inbredset-family" class="form-label">family</label>
<input id="txt:inbredset-family"
name="inbredset_family"
type="text"
placeholder="I am not sure what this is about."
- class="form-col-2" />
+ class="form-control" />
- <label for="txtarea:" class="form-col-1">Description</label>
+ <label for="txtarea:" class="form-label">Description</label>
<textarea id="txtarea:description"
name="description"
rows="5"
placeholder="Enter a description of this grouping/population"
- class="form-col-2"></textarea>
- </fieldset>
-
- <fieldset>
- <input type="submit"
- value="create grouping/population"
- class="btn btn-primary form-col-2" />
- </fieldset>
+ class="form-control"></textarea>
+ </div>
+
+ <button type="submit" class="btn btn-primary">create grouping/population</button>
</form>
{%endblock%}
diff --git a/qc_app/templates/samples/select-species.html b/qc_app/templates/samples/select-species.html
index 44c0d4f..edadc61 100644
--- a/qc_app/templates/samples/select-species.html
+++ b/qc_app/templates/samples/select-species.html
@@ -12,18 +12,19 @@
<form method="POST" action="{{url_for('samples.select_species')}}">
<legend class="heading">upload samples</legend>
- <fieldset>
- <label for="select_species02">Species</label>
- <select id="select_species02" name="species_id" required="required">
+ <div class="form-group">
+ <label for="select_species02" class="form-label">Species</label>
+ <select id="select_species02"
+ name="species_id"
+ required="required"
+ class="form-control">
<option value="">Select species</option>
{%for spec in species%}
<option value="{{spec.SpeciesId}}">{{spec.MenuName}}</option>
{%endfor%}
</select>
- </fieldset>
+ </div>
- <fieldset>
- <input type="submit" value="submit" class="btn btn-primary form-col-2" />
- </fieldset>
+ <button type="submit" class="btn btn-primary">submit</button>
</form>
{%endblock%}
diff --git a/qc_app/templates/samples/upload-samples.html b/qc_app/templates/samples/upload-samples.html
index 29b08f6..e62de57 100644
--- a/qc_app/templates/samples/upload-samples.html
+++ b/qc_app/templates/samples/upload-samples.html
@@ -3,16 +3,7 @@
{%block title%}Upload Samples{%endblock%}
-{%block css%}
-<style type="text/css">
- #form-samples {
- background-color: #D1D1D1;
- }
- #form-samples fieldset:nth-child(odd){
- background-color: white;
- }
-</style>
-{%endblock%}
+{%block css%}{%endblock%}
{%block contents%}
<h1 class="heading">upload samples</h1>
@@ -20,23 +11,23 @@
{{flash_messages("alert-success")}}
<p>You can now upload a character-separated value (CSV) file that contains
- details about your samples. The CSV file should have the following fields:
- <dl>
- <dt>Name</dt>
- <dd>The primary name for the sample</dd>
+ details about your samples. The CSV file should have the following fields:
+ <dl>
+ <dt>Name</dt>
+ <dd>The primary name for the sample</dd>
- <dt>Name2</dt>
- <dd>A secondary name for the sample. This can simply be the same as
- <strong>Name</strong> above. This field <strong>MUST</strong> contain a
- value.</dd>
+ <dt>Name2</dt>
+ <dd>A secondary name for the sample. This can simply be the same as
+ <strong>Name</strong> above. This field <strong>MUST</strong> contain a
+ value.</dd>
- <dt>Symbol</dt>
- <dd>A symbol for the sample. Can be an empty field.</dd>
+ <dt>Symbol</dt>
+ <dd>A symbol for the sample. Can be an empty field.</dd>
- <dt>Alias</dt>
- <dd>An alias for the sample. Can be an empty field.</dd>
- </dl>
- </p>
+ <dt>Alias</dt>
+ <dd>An alias for the sample. Can be an empty field.</dd>
+ </dl>
+</p>
<form id="form-samples"
method="POST"
@@ -45,32 +36,32 @@
population_id=population.InbredSetId)}}"
enctype="multipart/form-data">
<legend class="heading">upload samples</legend>
- <fieldset>
+
+ <div class="form-group">
<input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
- <label class="form-col-1">species:</label>
- <span class="form-col-2">{{species.SpeciesName}} [{{species.MenuName}}]</span>
- </fieldset>
+ <label class="form-label">species:</label>
+ <span class="form-text">{{species.SpeciesName}} [{{species.MenuName}}]</span>
+ </div>
- <fieldset>
+ <div class="form-group">
<input type="hidden" name="inbredset_id" value="{{population.InbredSetId}}" />
- <label class="form-col-1">grouping/population:</label>
- <span class="form-col-2">{{population.Name}} [{{population.FullName}}]</span>
- </fieldset>
+ <label class="form-label">grouping/population:</label>
+ <span class="form-text">{{population.Name}} [{{population.FullName}}]</span>
+ </div>
- <fieldset>
- <input id="chk:heading"
- type="checkbox"
- name="first_line_heading"
- class="form-col-1" />
- <label for="chk:heading" class="form-col-2">first line is a heading?</label>
- </fieldset>
+ <div class="form-group">
+ <label for="file-samples" class="form-label">select file</label>
+ <input type="file" name="samples_file" id="file:samples"
+ accept="text/csv, text/tab-separated-values"
+ class="form-control" />
+ </div>
- <fieldset>
- <label for="select:separator" class="form-col-1">field separator</label>
+ <div class="form-group">
+ <label for="select:separator" class="form-label">field separator</label>
<select id="select:separator"
name="separator"
required="required"
- class="form-col-2">
+ class="form-control">
<option value="">Select separator for your file: (default is comma)</option>
<option value="&#x0009;">TAB</option>
<option value="&#x0020;">Space</option>
@@ -81,43 +72,46 @@
<input id="txt:separator"
type="text"
name="other_separator"
- class="form-col-2" />
- <span class="form-col-2">
- This is the character that separates the fields in your CSV file. If you
- select "<strong>Other</strong>", then you must provide the separator in
- the text field provided.
- </span>
- </fieldset>
-
- <fieldset>
- <label for="txt:delimiter" class="form-col-1">field delimiter</label>
+ class="form-control" />
+ <small class="form-text text-muted">
+ If you select '<strong>Other</strong>' for the field separator value,
+ enter the character that separates the fields in your CSV file in the form
+ field below.
+ </small>
+ </div>
+
+ <div class="form-group form-check">
+ <input id="chk:heading"
+ type="checkbox"
+ name="first_line_heading"
+ class="form-check-input" />
+ <label for="chk:heading" class="form-check-label">
+ first line is a heading?</label>
+ <small class="form-text text-muted">
+ Select this if the first line in your file contains headings for the
+ columns.
+ </small>
+ </div>
+
+ <div class="form-group">
+ <label for="txt:delimiter" class="form-label">field delimiter</label>
<input id="txt:delimiter"
type="text"
name="field_delimiter"
maxlength="1"
- class="form-col-2" />
- <span class="form-col-2">
+ class="form-control" />
+ <small class="form-text text-muted">
If there is a character delimiting the string texts within particular
fields in your CSV, provide the character here. This can be left blank if
no such delimiters exist in your file.
- </span>
- </fieldset>
+ </small>
+ </div>
- <fieldset>
- <label for="file:samples" class="form-col-1">select file</label>
- <input type="file" name="samples_file" id="file:samples"
- accept="text/csv, text/tab-separated-values"
- class="form-col-2" />
- </fieldset>
-
- <fieldset>
- <input type="submit"
- value="upload samples file"
- class="btn btn-primary form-col-2" />
- </fieldset>
+ <button type="submit"
+ class="btn btn-primary">upload samples file</button>
</form>
-<table id="tbl:samples-preview">
+<table id="tbl:samples-preview" class="table">
<caption class="heading">preview content</caption>
<thead>