UI: Show progress of R/qtl2 bundle processing.

4 files changed, 94 insertions, 0 deletions

diff --git a/qc_app/templates/rqtl2/no-such-job.html b/qc_app/templates/rqtl2/no-such-job.html
new file mode 100644
index 0000000..b56980b
--- /dev/null
+++ b/qc_app/templates/rqtl2/no-such-job.html
@@ -0,0 +1,13 @@
+{%extends "base.html"%}
+{%from "flash_messages.html" import flash_messages%}
+
+{%block title%}Job Status{%endblock%}
+
+{%block contents%}
+<h1 class="heading">R/qtl2 job status</h1>
+
+<h2>R/qtl2 Upload: No Such Job</h2>
+
+<p class="alert-error">No job with ID {{jobid}} was found.</p>
+
+{%endblock%}
diff --git a/qc_app/templates/rqtl2/rqtl2-job-error.html b/qc_app/templates/rqtl2/rqtl2-job-error.html
new file mode 100644
index 0000000..72a334b
--- /dev/null
+++ b/qc_app/templates/rqtl2/rqtl2-job-error.html
@@ -0,0 +1,33 @@
+{%extends "base.html"%}
+{%from "cli-output.html" import cli_output%}
+
+{%block title%}Job Status{%endblock%}
+
+{%block contents%}
+<h1 class="heading">R/qtl2 job status</h1>
+
+<h2>R/qtl2 Upload: Job Status</h2>
+
+<div class="explainer">
+  <p>The processing of the R/qtl2 bundle you uploaded has failed. We have
+    provided some information below to help you figure out what the problem
+    could be.</p>
+  <p>If you find that you cannot figure out what the problem is on your own,
+    please contact the team running the system for assistance, providing the
+    R/qtl2 bundle you uploaded, and a screenshot of this page.</p>
+</div>
+
+<h4>stdout</h4>
+{{cli_output(job, "stdout")}}
+
+<h4>stderr</h4>
+{{cli_output(job, "stderr")}}
+
+<h4>Log</h4>
+<div class="cli-output">
+  {%for msg in messages%}
+  {{msg}}<br />
+  {%endfor%}
+</div>
+
+{%endblock%}
diff --git a/qc_app/templates/rqtl2/rqtl2-job-results.html b/qc_app/templates/rqtl2/rqtl2-job-results.html
new file mode 100644
index 0000000..4ecd415
--- /dev/null
+++ b/qc_app/templates/rqtl2/rqtl2-job-results.html
@@ -0,0 +1,24 @@
+{%extends "base.html"%}
+{%from "cli-output.html" import cli_output%}
+
+{%block title%}Job Status{%endblock%}
+
+{%block contents%}
+<h1 class="heading">R/qtl2 job status</h1>
+
+<h2>R/qtl2 Upload: Job Status</h2>
+
+<div class="explainer">
+  <p>The processing of the R/qtl2 bundle you uploaded has completed
+    successfully.</p>
+  <p>You should now be able to use GeneNetwork to run analyses on your data.</p>
+</div>
+
+<h4>Log</h4>
+<div class="cli-output">
+  {%for msg in messages%}
+  {{msg}}<br />
+  {%endfor%}
+</div>
+
+{%endblock%}
diff --git a/qc_app/templates/rqtl2/rqtl2-job-status.html b/qc_app/templates/rqtl2/rqtl2-job-status.html
new file mode 100644
index 0000000..a8bc640
--- /dev/null
+++ b/qc_app/templates/rqtl2/rqtl2-job-status.html
@@ -0,0 +1,24 @@
+{%extends "base.html"%}
+{%from "flash_messages.html" import flash_messages%}
+
+{%block title%}Job Status{%endblock%}
+
+{%block extrameta%}
+<meta http-equiv="refresh" content="3">
+{%endblock%}
+
+{%block contents%}
+<h1 class="heading">R/qtl2 job status</h1>
+
+<h2>R/qtl2 Upload: Job Status</h2>
+
+{{job}}
+
+<h4>Log</h4>
+<div class="cli-output">
+  {%for msg in messages%}
+  {{msg}}<br />
+  {%endfor%}
+</div>
+
+{%endblock%}