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authorFrederick Muriuki Muriithi2024-01-18 05:52:52 +0300
committerFrederick Muriuki Muriithi2024-01-18 06:05:51 +0300
commitcf8d133b110d87aed5cb6695711616625a6669fd (patch)
tree2723f88cd1c1cd5b6c763c7030209d18975acffb /qc_app/templates/rqtl2/select-probeset-study-id.html
parent33e106334a212853842c30f8c595da1099c3d84e (diff)
downloadgn-uploader-cf8d133b110d87aed5cb6695711616625a6669fd.tar.gz
Create new ProbeSet study.
Diffstat (limited to 'qc_app/templates/rqtl2/select-probeset-study-id.html')
-rw-r--r--qc_app/templates/rqtl2/select-probeset-study-id.html79
1 files changed, 73 insertions, 6 deletions
diff --git a/qc_app/templates/rqtl2/select-probeset-study-id.html b/qc_app/templates/rqtl2/select-probeset-study-id.html
index bb31fde..34aa54e 100644
--- a/qc_app/templates/rqtl2/select-probeset-study-id.html
+++ b/qc_app/templates/rqtl2/select-probeset-study-id.html
@@ -1,5 +1,5 @@
{%extends "base.html"%}
-{%from "flash_messages.html" import flash_messages%}
+{%from "flash_messages.html" import flash_messages, flash_all_messages%}
{%block title%}Upload R/qtl2 Bundle{%endblock%}
@@ -12,9 +12,13 @@
<p>This page gives you the ability to do that.</p>
</div>
+{{flash_all_messages()}}
+
<form method="POST"
- action="#">
- <legend class="heading">Select from existing ProbeSet datasets</legend>
+ action="{{url_for('upload.rqtl2.select_probeset_study',
+ species_id=species.SpeciesId, population_id=population.Id)}}"
+ id="frm:select-probeset-study">
+ <legend class="heading">Select from existing ProbeSet studies</legend>
<input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
<input type="hidden" name="population_id"
@@ -51,9 +55,72 @@
<p style="color:#FE3535; padding-left:20em; font-weight:bolder;">OR</p>
<form method="POST"
- action="#">
- <legend class="heading">Create new ProbeSet dataset</legend>
- <strong style="color: red;font-weight:bold;">Under construction</strong>
+ action="{{url_for('upload.rqtl2.create_probeset_study',
+ species_id=species.SpeciesId, population_id=population.Id)}}"
+ id="frm:create-probeset-study">
+ <legend class="heading">Create new ProbeSet study</legend>
+
+ <input type="hidden" name="species_id" value="{{species.SpeciesId}}" />
+ <input type="hidden" name="population_id"
+ value="{{population.InbredSetId}}" />
+ <input type="hidden" name="rqtl2_bundle_file"
+ value="{{rqtl2_bundle_file}}" />
+ <input type="hidden" name="geno-dataset-id" value="{{geno_dataset.Id}}" />
+
+ <fieldset>
+ <label for="select:platform">Platform</label>
+ <select id="select:platform"
+ name="platformid"
+ required="required"
+ {%if platforms | length == 0%}disabled="disabled"{%endif%}>
+ <option value="">Select a platform</option>
+ {%for platform in platforms%}
+ <option value="{{platform.GeneChipId}}">
+ {{platform.GeneChipName}} ({{platform.Name}})
+ </option>
+ {%endfor%}
+ </select>
+ </fieldset>
+
+ <fieldset>
+ <label for="select:tissue">Tissue</label>
+ <select id="select:tissue"
+ name="tissueid"
+ required="required"
+ {%if tissues | length == 0%}disabled="disabled"{%endif%}>
+ <option value="">Select tissue</option>
+ {%for tissue in tissues%}
+ <option value="{{tissue.Id}}">
+ {{tissue.TissueName}} ({{tissue.Short_Name}})
+ </option>
+ {%endfor%}
+ </select>
+ </fieldset>
+
+ <fieldset>
+ <label for="txt:studyname">Study name</label>
+ <input type="text" id="txt:studyname" name="studyname"
+ placeholder="Name of the study. (Required)"
+ required="required" />
+ </fieldset>
+
+ <fieldset>
+ <label for="txt:studyfullname">Study name</label>
+ <input type="text" id="txt:studyfullname" name="studyfullname"
+ placeholder="Longer name of the study. (Optional)" />
+ </fieldset>
+
+ <fieldset>
+ <label for="txt:studyshortname">Study name</label>
+ <input type="text" id="txt:studyshortname" name="studyshortname"
+ placeholder="Shorter name of the study. (Optional)" />
+ </fieldset>
+
+ <fieldset>
+ <input type="submit"
+ value="create study"
+ class="btn btn-main form-col-2" />
+ </fieldset>
</form>
{%endblock%}