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authorFrederick Muriuki Muriithi2022-04-11 12:38:52 +0300
committerFrederick Muriuki Muriithi2022-04-11 12:38:52 +0300
commita126edd7a9f2a72bf744a34c57aa9cb23568ba29 (patch)
treeebfd5e30fa9f850454f81e3ee839c67cf46013fd /README.org
parent7ea15269cb85c32e55ebcc6381de77810d898927 (diff)
downloadgn-uploader-a126edd7a9f2a72bf744a34c57aa9cb23568ba29.tar.gz
Set up initial, failing tests for cell values
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@@ -24,3 +24,23 @@ following criteria:
- - there must be a number to the left side of the dot (e.g. 0.55555 is allowed but .55555 is not).
- check line endings to make sure they are Unix and not DOS
- check strain headers against a source of truth (see strains.csv)
+
+** Development
+
+For reproducibility, this project is developed using guix.
+
+To launch a guix shell for development, do:
+
+#+BEGIN_SRC shell
+ guix shell --container --network --manifest=manifest.scm
+#+END_SRC
+
+to get an environment that is isolated from the rest of your system.
+
+*** Tests
+
+Run tests with:
+
+#+BEGIN_SRC shell
+ pytest
+#+END_SRC