gn-transform-databases - Data transformers for GeneNetwork (particularly to RDF)

Age	Commit message (Expand)	Author
2024-07-10	Replace "FIXME" with relevant info in the docs.	Munyoki Kilyungi
2024-07-10	Unfill paragraphs.	Munyoki Kilyungi
2024-07-10	Document running actual transformation scripts	Frederick Muriuki Muriithi
2024-07-10	Rename script: Give file a more relevant name.	Frederick Muriuki Muriithi
2024-07-10	Replace "dump" -> "transform" where relevant.	Munyoki Kilyungi
2024-07-10	Remove the "generif-data-file" from the documentation.	Munyoki Kilyungi
2024-07-10	Provide sample JSON file and update instruction in docs	Frederick Muriuki Muriithi
2024-05-20	Add pointers to git metadata in RDF for the dataset metadata.	Munyoki Kilyungi
2024-05-15	manifest.scm: Use upstream ccwl.	Munyoki Kilyungi
2024-05-15	Use a set to represent a phenotype's owner.	Munyoki Kilyungi
2024-05-15	Replace rdfs:label with gnt:traitId for Phenotypes.	Munyoki Kilyungi
2024-02-15	Refactor how changes are committed and pushed.	Munyoki Kilyungi
2024-02-15	Remove call to string-append when defining dir-name local var.	Munyoki Kilyungi
2024-02-15	Filter out files that only have "None".	Munyoki Kilyungi
2024-02-14	Capitalize the first string of every path.	Munyoki Kilyungi
2024-02-13	Convert extra dataset metadata to text-files.	Munyoki Kilyungi
2024-02-13	Remove more fields from dataset's RDF output.	Munyoki Kilyungi
2024-02-13	Fix missplaced parens.	Munyoki Kilyungi
2024-02-09	Re-add triplets that describe dataset terms.	Munyoki Kilyungi
2024-02-09	Update push and reset git commands.	Munyoki Kilyungi
2024-02-09	Use correct path to the datasets directory.	Munyoki Kilyungi
2024-02-08	Delete rdf triplets from dataset transform.	Munyoki Kilyungi
2024-02-08	Add method for commiting changes to the gn-docs git repo.	Munyoki Kilyungi
2024-02-08	Delete unused variable in the getopts arglist.	Munyoki Kilyungi
2024-02-08	Fix typo.	Munyoki Kilyungi
2024-02-08	Fix how the dataset directory is constructed.	Munyoki Kilyungi
2024-02-08	Remove "string->identifier" for the dataset directory name.	Munyoki Kilyungi
2024-02-08	Use correct format string literal when printing out sql results.	Munyoki Kilyungi
2024-02-08	Update local git-repo directory.	Munyoki Kilyungi
2024-02-08	Add a basic guile script to transform stored rtf data to files.	Munyoki Kilyungi
2024-01-08	Add InfoFiles.Experiment_Type metadata.	Munyoki Kilyungi
2024-01-05	Correct formatting for the gnt:location predicate for ProbeSets.	Munyoki Kilyungi
2023-12-22	Fix typo with pantherLink ResourceLink.	Munyoki Kilyungi
2023-12-22	Use correct property for classifying pantherLink as a resource.	Munyoki Kilyungi
2023-12-22	Delete duplicate entries for gnc:biogpsLink/gnc:gtexLink.	Munyoki Kilyungi
2023-12-22	Update handling of RGD_ID field in genelist metadata transform.	Munyoki Kilyungi
2023-12-22	Replace gnt:symbol with gnt:geneSymbol.	Munyoki Kilyungi
2023-12-22	Refactor gene metadata RDF transform.	Munyoki Kilyungi
2023-12-22	Replace gnc:GeneSymbol with gnc:Gene.	Munyoki Kilyungi
2023-12-22	Delete "GROUP BY" when transforming genelist/genelist_rn33 metadata.	Munyoki Kilyungi
2023-12-22	Use gnt:geneSymbol instead of rdfs:label/gnt:symbol.	Munyoki Kilyungi
2023-12-22	Use gnt:hasGeneId instead of gnt:gene/dct:references.	Munyoki Kilyungi
2023-12-22	Move gnt:hasGeneId definitions to genelist.scm	Munyoki Kilyungi
2023-12-20	Set up as Guix channel for CI.	Arun Isaac
2023-12-20	Use guile to run tests.	Arun Isaac
2023-12-20	Set correct top level module directory.	Arun Isaac
2023-12-20	Fix srfi-26 import typo.	Arun Isaac
2023-12-15	Preserve gene symbol case when used as an identifer.	Munyoki Kilyungi
2023-12-15	Use URI encoding for OMIM and homologene resource link handling.	Munyoki Kilyungi
2023-12-15	Refactor Uniprot and GeneId handling in ProbeSet RDF transform.	Munyoki Kilyungi