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authorMunyoki Kilyungi2023-12-19 18:56:11 +0300
committerMunyoki Kilyungi2023-12-22 11:53:21 +0300
commit203442c692f205dca37a9f32494e2e71907a58e6 (patch)
tree1f19fdffbdf31b7de9351813e484467ecb58e755
parentcbf77678b01c45faf471f8582acdbb3fe957a49e (diff)
downloadgn-transform-databases-203442c692f205dca37a9f32494e2e71907a58e6.tar.gz
Use gnt:hasGeneId instead of gnt:gene/dct:references.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rwxr-xr-xexamples/genelist.scm2
-rwxr-xr-xexamples/probeset.scm2
2 files changed, 2 insertions, 2 deletions
diff --git a/examples/genelist.scm b/examples/genelist.scm
index 185ea61..78df9d7 100755
--- a/examples/genelist.scm
+++ b/examples/genelist.scm
@@ -90,7 +90,7 @@
     (set rdf:type 'gnc:GeneSymbol)
     (set rdfs:label (field GeneList GeneSymbol))
     (set dct:description (sanitize-rdf-string (field GeneList GeneDescription)))
-    (set gnt:gene (ontology 'gene: (field GeneList GeneId)))
+    (set gnt:hasGeneId (ontology 'gene: (field GeneList GeneId)))
     (set dct:references
          (let ((symbol (string-trim-both
                         (field GeneList GeneSymbol))))
diff --git a/examples/probeset.scm b/examples/probeset.scm
index 92c6a2a..0f83a86 100755
--- a/examples/probeset.scm
+++ b/examples/probeset.scm
@@ -122,7 +122,7 @@
                             ((string=? "-" strand-probe)
                              " on the minus strand")
                             (else "")))))))
-    (set dct:references
+    (set gnt:hasGeneId
          (ontology 'gene:
                    (string-trim-both (field ProbeSet GeneId))))
     ;; OMIM Link