| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 10 days | Only export InbredSet where public > 0. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 10 days | Replace gnt:belongs_to_group -> gnt:has_strain. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 10 days | Replace gnt:is_species_of -> gnt:has_strain. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Add fan outs for mapping/avg methods in GN. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Set global namespace prefix for foaf. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Add missing prefixes. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Use resolvable foaf: prefix. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Replace rdfs:type with rdf:type. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Use rdf:type explicitly and fix SKOS avg/mapping method triples. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Add inbred_set back-links from species. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Add back-links for different triples. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Set global namespaces in load-rdf script. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Update Mapping/Averaging methods ontology. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Add more metadata for mappings. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Replace rdf:isDefinedBy with gnt:has_wikidata_link for species. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Refine species/indbredset: labels, definitions, and property types. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Replace skos:prefLabel/skos:label with skos:definition ∀ "gnc:" | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | Delete blank-node. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 13 days | sed -i 's|gnt:genetic-type|gnt:genetic_type|g' ./*/**.scm ./*scm | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-14 | Replace camelCase with snake_case. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-14 | Replace "genenetwork.org/" with "rdf.genenetwork.org/v1/". | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Fix comment for gnt:belongs_to_species. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Trigger CD re-build. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Switch to versioned rdf.genenetwork namespace. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Snake case variable. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Explicitly set the connection string to utf8. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Add extra string utility functions. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Strictly follow PN_LOCAL rules when constructing qnames. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Have an ID function as the default func for string->identifier. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Update schema for several transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Use "-" in qnames. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Update how the species/inbredsets are transformed. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Import virtuoso-ose and mariadb from (gnu packages databases). | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Delete duplicated function. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Move remap-species-identifiers to (transform triples). | Munyoki Kilyungi | |
| * examples/classification.scm (remap-species-identifiers): Move this... * transform/triples.scm: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Snake case gn/gnt/gnc identifiers. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-13 | Update documentation. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-09-03 | Use the guile command directly and update the load-path explicitly. | Frederick Muriuki Muriithi | |
| Avoid using the './pre-inst-env' file that will probably not exist in installed modules. Instead, prefer the explicit path, relative to the "entry-point" file, that will be more consistent, even in an install. | |||
| 2025-03-24 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-03-18 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-03-18 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-03-18 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-03-17 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-03-12 | Trigger new transforms. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-13 | Test post-receive hook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-09 | Reset old generif dump to: 0bbf317208b8. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-09 | Add old generif file. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-10-31 | Revert "Rename %sparql-port -> %sparql-http-server-port." | Munyoki Kilyungi | |
| This reverts commit 69e3f47fa29f9f967dfa66860edaec51c0de0125. | |||
| 2024-10-31 | Rename %sparql-port -> %sparql-http-server-port. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-10-31 | Update generate-ttl-files.scm | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
 |
index : gn-transform-databases | |
| Data transformers for GeneNetwork (particularly to RDF) |
| about summary refs log tree commit diff |