Switch to versioned rdf.genenetwork namespace.

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>

13 files changed, 37 insertions, 37 deletions

diff --git a/examples/classification.scm b/examples/classification.scm
index 6195ea6..6cd9e9f 100755
--- a/examples/classification.scm
+++ b/examples/classification.scm
@@ -124,10 +124,10 @@
    (connection %connection-settings)
    (table-metadata? #f)
    (prefixes
-    '(("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
+    '(("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
       ("owl:" "<http://www.w3.org/2002/07/owl#>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("xkos:" "<http://rdf-vocabulary.ddialliance.org/xkos#>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
diff --git a/examples/dataset-metadata.scm b/examples/dataset-metadata.scm
index c40c42c..fc36a8f 100755
--- a/examples/dataset-metadata.scm
+++ b/examples/dataset-metadata.scm
@@ -483,9 +483,9 @@
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("xkos:" "<http://rdf-vocabulary.ddialliance.org/xkos#>")
       ("geoSeries:" "<http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=>")
-      ("gnt:" "<http://genenetwork.org/term/>")
-      ("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
       ("owl:" "<http://www.w3.org/2002/07/owl#>")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
diff --git a/examples/genbank.scm b/examples/genbank.scm
index 993c3bf..149ac0f 100755
--- a/examples/genbank.scm
+++ b/examples/genbank.scm
@@ -50,9 +50,9 @@
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("xkos:" "<http://rdf-vocabulary.ddialliance.org/xkos#>")
-      ("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("dct:" "<http://purl.org/dc/terms/>")
       ("foaf:" "<http://xmlns.com/foaf/0.1/>")
       ("pubmed:" "<http://rdf.ncbi.nlm.nih.gov/pubmed/>")
diff --git a/examples/genelist.scm b/examples/genelist.scm
index dbca921..60ae4cd 100755
--- a/examples/genelist.scm
+++ b/examples/genelist.scm
@@ -343,10 +343,10 @@
    (connection %connection-settings)
    (table-metadata? #f)
    (prefixes
-    '(("gn:" "<http://genenetwork.org/id/>")
-      ("probeset:" "<http://genenetwork.org/probeset/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+    '(("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("probeset:" "<http://rdf.genenetwork.org/v1/probeset/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
       ("dct:" "<http://purl.org/dc/terms/>")
diff --git a/examples/generif.scm b/examples/generif.scm
index 994c540..c4b70ae 100755
--- a/examples/generif.scm
+++ b/examples/generif.scm
@@ -153,9 +153,9 @@ GROUP BY GeneRIF.Id, GeneRIF.versionId, GeneRIF.symbol")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("xkos:" "<http://rdf-vocabulary.ddialliance.org/xkos#>")
-      ("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("dct:" "<http://purl.org/dc/terms/>")
       ("foaf:" "<http://xmlns.com/foaf/0.1/>")
       ("pubmed:" "<http://rdf.ncbi.nlm.nih.gov/pubmed/>")
diff --git a/examples/genotype.scm b/examples/genotype.scm
index 0b0cd8e..ac170be 100755
--- a/examples/genotype.scm
+++ b/examples/genotype.scm
@@ -92,9 +92,9 @@
    (table-metadata? #f)
    (prefixes
     '(("dct:" "<http://purl.org/dc/terms/>")
-      ("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
       ("owl:" "<http://www.w3.org/2002/07/owl#>")
diff --git a/examples/phenotype.scm b/examples/phenotype.scm
index 5a118b8..ae24d66 100755
--- a/examples/phenotype.scm
+++ b/examples/phenotype.scm
@@ -120,10 +120,10 @@
    (table-metadata? #f)
    (prefixes
     '(("dct:" "<http://purl.org/dc/terms/>")
-      ("gn:" "<http://genenetwork.org/id/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
       ("owl:" "<http://www.w3.org/2002/07/owl#>")
-      ("gnc:" "<http://genenetwork.org/category/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("sdmx-measure:" "<http://purl.org/linked-data/sdmx/2009/measure#>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
diff --git a/examples/publication.scm b/examples/publication.scm
index eab4da7..6b57856 100755
--- a/examples/publication.scm
+++ b/examples/publication.scm
@@ -70,12 +70,12 @@
    (connection %connection-settings)
    (table-metadata? #f)
    (prefixes
-    '(("gnt:" "<http://genenetwork.org/term/>")
+    '(("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("fabio:" "<http://purl.org/spar/fabio/>")
       ("dct:" "<http://purl.org/dc/terms/>")
       ("prism:" "<http://prismstandard.org/namespaces/basic/2.0/>")
-      ("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
+      ("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
       ("pubmed:" "<http://rdf.ncbi.nlm.nih.gov/pubmed/>")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
       ("xsd:" "<http://www.w3.org/2001/XMLSchema#>")
diff --git a/examples/schema.scm b/examples/schema.scm
index bfc5747..5d74d27 100755
--- a/examples/schema.scm
+++ b/examples/schema.scm
@@ -61,9 +61,9 @@
        (lambda ()
          (prefix "rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
          (prefix "rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")
-         (prefix "gn:" "<http://genenetwork.org/id/>")
-         (prefix "gnc:" "<http://genenetwork.org/category/>")
-         (prefix "gnt:" "<http://genenetwork.org/term/>")
+         (prefix "gn:" "<http://rdf.genenetwork.org/v1/id/>")
+         (prefix "gnc:" "<http://rdf.genenetwork.org/v1/category/>")
+         (prefix "gnt:" "<http://rdf.genenetwork.org/v1/term/>")
          (prefix "xsd:" "<http://www.w3.org/2001/XMLSchema#>")
          (prefix "owl:" "<http://www.w3.org/2002/07/owl#>")
          (newline)
diff --git a/examples/strains.scm b/examples/strains.scm
index b2332bd..cb4978f 100755
--- a/examples/strains.scm
+++ b/examples/strains.scm
@@ -114,10 +114,10 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used.
    (connection %connection-settings)
    (table-metadata? #f)
    (prefixes
-    '(("gn:" "<http://genenetwork.org/id/>")
-      ("gnc:" "<http://genenetwork.org/category/>")
+    '(("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
       ("owl:" "<http://www.w3.org/2002/07/owl#>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
       ("xkos:" "<http://rdf-vocabulary.ddialliance.org/xkos#>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
diff --git a/examples/tissue.scm b/examples/tissue.scm
index 6bd30ff..82cc226 100755
--- a/examples/tissue.scm
+++ b/examples/tissue.scm
@@ -43,10 +43,10 @@
    (connection %connection-settings)
    (table-metadata? #f)
    (prefixes
-    '(("gn:" "<http://genenetwork.org/id/>")
-      ("gnt:" "<http://genenetwork.org/term/>")
+    '(("gn:" "<http://rdf.genenetwork.org/v1/id/>")
+      ("gnt:" "<http://rdf.genenetwork.org/v1/term/>")
       ("skos:" "<http://www.w3.org/2004/02/skos/core#>")
-      ("gnc:" "<http://genenetwork.org/category/>")
+      ("gnc:" "<http://rdf.genenetwork.org/v1/category/>")
       ("rdf:" "<http://www.w3.org/1999/02/22-rdf-syntax-ns#>")
       ("rdfs:" "<http://www.w3.org/2000/01/rdf-schema#>")))
    (inputs
diff --git a/load-rdf.scm b/load-rdf.scm
index aaf1b00..db1e1a0 100755
--- a/load-rdf.scm
+++ b/load-rdf.scm
@@ -16,7 +16,7 @@
              (web uri))
 
 (define %graph-uri
-  "http://genenetwork.org")
+  "http://rdf.genenetwork.org/v1")
 
 (define (call-with-pipe proc mode program . args)
   "Execute PROGRAM ARGS ... in a subprocess with a pipe of MODE to
diff --git a/schema/species.ttl b/schema/species.ttl
index f0d5207..60ebd17 100644
--- a/schema/species.ttl
+++ b/schema/species.ttl
@@ -3,8 +3,8 @@
 @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
 
 @prefix wd: <http://www.wikidata.org/entity/> .
-@prefix gn: <http://genenetwork.org/id/> .
-@prefix gnt: <http://genenetwork.org/term/> .
+@prefix gn: <http://rdf.genenetwork.org/v1/id/> .
+@prefix gnt: <http://rdf.genenetwork.org/v1/term/> .
 
 # sorted on short names:
 #