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authorMunyoki Kilyungi2026-01-26 12:06:34 +0300
committerMunyoki Kilyungi2026-01-26 12:06:34 +0300
commit93d8bd745d24de538c075caf7920bab02bbcce23 (patch)
treea614f599fcd72a93b5816c40bbc9219a83635845
parent3a59edd226075dd9ed1970e690fb025a40e7b74b (diff)
downloadgn-transform-databases-93d8bd745d24de538c075caf7920bab02bbcce23.tar.gz
Replace gnt:belongs_to_group -> gnt:has_strain.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rwxr-xr-xexamples/classification.scm12
-rwxr-xr-xexamples/dataset-metadata.scm8
-rwxr-xr-xexamples/phenotype.scm2
3 files changed, 11 insertions, 11 deletions
diff --git a/examples/classification.scm b/examples/classification.scm
index a0e92e2..ddf4775 100755
--- a/examples/classification.scm
+++ b/examples/classification.scm
@@ -140,12 +140,12 @@
(gnt:uses_mapping_method rdfs:domain gnc:set)
(gnt:uses_mapping_method rdfs:range gnc:mapping_method)
(gnt:uses_mapping_method rdfs:comment "The method used to map genetic or experimental data for this resource.")
- (gnt:belongs_to_group a owl:ObjectProperty)
- (gnt:belongs_to_group rdf:comment "Indicates the group the resources belongs to")
- (gnt:belongs_to_group schema:domainIncludes dcat:Dataset)
- (gnt:belongs_to_group schema:domainIncludes gnc:species)
- (gnt:belongs_to_group rdfs:range gnc:set)
- (gnt:belongs_to_group rdfs:label "belongs-to-group"))
+ (gnt:has_strain a owl:ObjectProperty)
+ (gnt:has_strain rdf:comment "Indicates the group the resources belongs to")
+ (gnt:has_strain schema:domainIncludes dcat:Dataset)
+ (gnt:has_strain schema:domainIncludes gnc:species)
+ (gnt:has_strain rdfs:range gnc:set)
+ (gnt:has_strain rdfs:label "belongs-to-group"))
(triples (string->identifier "set" (field InbredSet Name InbredSetName) #:separator "_")
(set rdf:type 'gnc:set)
(set rdfs:label (field InbredSet FullName))
diff --git a/examples/dataset-metadata.scm b/examples/dataset-metadata.scm
index 4c64993..53ff2d7 100755
--- a/examples/dataset-metadata.scm
+++ b/examples/dataset-metadata.scm
@@ -200,7 +200,7 @@
(set dct:identifier (format #f "GN~a" (field InfoFiles GN_AccesionId)))
(set dct:accessRights (string-downcase
(field DatasetStatus DatasetStatusName)))
- (set gnt:belongs_to_group
+ (set gnt:has_strain
(string->identifier
"set"
(field ("IFNULL(InbredSet.Name, IFNULL(PublishInbredSet.Name, GenoInbredSet.Name))"
@@ -398,7 +398,7 @@
(set dct:created (annotate-field
(field PublishFreeze CreateTime)
'^^xsd:date))
- (set gnt:belongs_to_group
+ (set gnt:has_strain
(string->identifier
"set" (field InbredSet Name InbredSetName)
#:separator "_"))))
@@ -418,7 +418,7 @@
(set dct:created (annotate-field
(field GenoFreeze CreateTime)
'^^xsd:date))
- (set gnt:belongs_to_group
+ (set gnt:has_strain
(string->identifier
"set" (field InbredSet Name InbredSetName)
#:separator "_"
@@ -456,7 +456,7 @@
'^^xsd:datetime))
(set gnt:uses_data_scale (field ProbeSetFreeze DataScale))
(set gnt:has_tissue (string->identifier "tissue" (field Tissue Short_Name) #:separator "_"))
- (set gnt:belongs_to_group (string->identifier "set" (field InbredSet Name InbredSetName) #:separator "_"))))
+ (set gnt:has_strain (string->identifier "set" (field InbredSet Name InbredSetName) #:separator "_"))))
diff --git a/examples/phenotype.scm b/examples/phenotype.scm
index ae24d66..03eec45 100755
--- a/examples/phenotype.scm
+++ b/examples/phenotype.scm
@@ -58,7 +58,7 @@
Phenotype))
#:separator "_")
(set rdf:type 'gnc:phenotype)
- (set gnt:belongs_to_group
+ (set gnt:has_strain
(string->identifier
"set" (field InbredSet Name InbredSetName)
#:separator "_"))