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8 daysAdd gn:genotype->metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
8 daysAdd missing definitions for gnc:has_probeset_data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
8 daysDelete genotypes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
8 daysCorrectly use the correct fields from Datasets table.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
8 daysDelete duplication in molecular-traits.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
8 daysDelete monkey data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysUse correct name for gene-chip.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysSanitize rdf string for InbredSet description.Munyoki Kilyungi
Error: classification.ttl:409 - Turtle string error - illegal escape \x (#x78) Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysRemove monkey data.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysDelete old dataset modelling.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysReplace "cruft" -> "obsolete".Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysUpdate mRNA datasets.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysRemodel genechip metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysMove genechip ontology to own file.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysMove investigators transform to its own file.Munyoki Kilyungi
* examples/dataset-metadata.scm (investigators): Delete. (option-spec)[investigators]: Delete * transform/strings.scm (fix-email-id, investigator-attributes->id): Move these ... * examples/investigators.scm: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysclassification.scm: Rename transformers.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysMark monkey data as cruft.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysMove fix-email-id/investigator-attributes->id to string.scmMunyoki Kilyungi
* examples/dataset-metadata.scm (fix-email-id, investigator-attributes->id): Move this ... * transform/strings.scm: here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysCorrectly use molecular_trait.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysRename things.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
9 daysAdd molecular traits.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysUse correct hierarchy.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysDelete un-used ontology.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysUse snake case.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysRename tissue.scm -> molecular-traits.scm.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysRename has_population_category -> has_reference_population.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
10 daysCorrectly remodel GN classification hierarchy.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd link for family in inbredset.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysMark-up inbredset description as HTML.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysUpdate schema.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd inbredset fanout.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd species families fan-out.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd inbredset-families.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd species-families.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysReplace gnt:belongs_to_species -> gnt:has_species.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd InbredSet description metadata.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysAdd family metadata for species.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysUpdate term metadata for gnt:has_family.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysOnly export InbredSet where public > 0.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
11 daysReplace gnt:belongs_to_group -> gnt:has_strain.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
12 daysReplace gnt:is_species_of -> gnt:has_strain.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Add fan outs for mapping/avg methods in GN.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Set global namespace prefix for foaf.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Add missing prefixes.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Use resolvable foaf: prefix.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Replace rdfs:type with rdf:type.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Use rdf:type explicitly and fix SKOS avg/mapping method triples.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Add inbred_set back-links from species.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Add back-links for different triples.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2026-01-23Set global namespaces in load-rdf script.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
generated by cgit-pink 1.4.1 (git 2.36.1) at 2026-02-06 20:54:06 +0000