Mark monkey data as cruft.

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>

1 files changed, 29 insertions, 0 deletions

diff --git a/schema/gn-curation-metadata.ttl b/schema/gn-curation-metadata.ttl
new file mode 100644
index 0000000..e7c6efa
--- /dev/null
+++ b/schema/gn-curation-metadata.ttl
@@ -0,0 +1,29 @@
+@prefix gn:   <http://rdf.genenetwork.org/v1/id/> .
+@prefix gnt:  <http://rdf.genenetwork.org/v1/term/> .
+@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
+@prefix rdf:  <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
+@prefix owl:  <http://www.w3.org/2002/07/owl#> .
+@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
+
+gnt:editorial_status rdf:type owl:DatatypeProperty ;
+    rdfs:label "editorial status" ;
+    rdfs:comment "Curation and lifecycle status of a GN entity." .
+
+gnt:cruft rdf:type skos:Concept ;
+    skos:prefLabel "cruft" ;
+    skos:definition "Data retained for historical reasons but known to be incomplete, low-quality, or not scientifically useful." .
+
+gnt:deprecated rdf:type skos:Concept ;
+    skos:prefLabel "deprecated" ;
+    skos:definition "Data that should no longer be exposed in primary user interfaces." .
+
+gn:set_Macaca_fasicularis
+    gnt:editorial_status gnt:cruft ;
+    owl:deprecated "true"^^xsd:boolean ;
+    rdfs:comment """Sparse expression data from primate samples with no genotypes, phenotypes, cofactors, or reliable metadata (e.g. sex).  Entered historically as a demo project to encourage open data sharing.  Scientifically limited and retained only for archival reasons.""" .
+
+gn:Macaca_nemestrina
+    gnt:editorial_status gnt:cruft ;
+    rdfs:comment """GN contains limited and low-quality experimental data for this species.  Existing datasets lack genotypes, phenotypes, and essential metadata.  Representation is historically motivated rather than scientifically sound.
+""" .