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2023-12-22Use gnt:geneSymbol instead of rdfs:label/gnt:symbol.Munyoki Kilyungi
2023-12-22Use gnt:hasGeneId instead of gnt:gene/dct:references.Munyoki Kilyungi
2023-12-22Move gnt:hasGeneId definitions to genelist.scmMunyoki Kilyungi
2023-12-20Set up as Guix channel for CI.Arun Isaac
2023-12-20Use guile to run tests.Arun Isaac
2023-12-20Set correct top level module directory.Arun Isaac
2023-12-20Fix srfi-26 import typo.Arun Isaac
2023-12-15Preserve gene symbol case when used as an identifer.Munyoki Kilyungi
2023-12-15Use URI encoding for OMIM and homologene resource link handling.Munyoki Kilyungi
2023-12-15Refactor Uniprot and GeneId handling in ProbeSet RDF transform.Munyoki Kilyungi
2023-12-15Add missing "gene:" prefix in ProbeSet RDF transform.Munyoki Kilyungi
2023-12-15Trim gene symbol rdfs:label for the GeneList_rn33 table.Munyoki Kilyungi
2023-12-15Use URI encoding for symbol-based resource link URLs.Munyoki Kilyungi
2023-12-14Remove "remap-species-identifiers" from generif transform.Munyoki Kilyungi
2023-12-14Link extra resources to genes and trim gene symbols.Munyoki Kilyungi
2023-12-14Refactor symbol identifier in strains.scm.Munyoki Kilyungi
2023-12-14Add GeneList metadata RDF transform.Munyoki Kilyungi
2023-12-14Remove some resource links from ProbeSet RDF transform.Munyoki Kilyungi
2023-12-14Use correct identifier for the AvgMethod table.Munyoki Kilyungi
2023-12-04Replace xkos:classifiedUnder -> gnt:belongsToGroup.Munyoki Kilyungi
2023-12-04Replace xkos:classifiedUnder -> gnt:belongsToSpecies for species.Munyoki Kilyungi
2023-12-04Replace xkos:classifiendUnder with gnt:belongsToGroup for groups.Munyoki Kilyungi
2023-12-04Fix typo in publishfreeze transform.Munyoki Kilyungi
2023-11-30Trim the contributor's name when transforming phenotype metadata.Munyoki Kilyungi
2023-11-30Add a label to the "gnt:lodScore" term.Munyoki Kilyungi
2023-11-30Set a phenotype's gnt:locus to a genotype.Munyoki Kilyungi
2023-11-30Replace LRS with LOD Score.Munyoki Kilyungi
2023-11-24Move remap-species-identifier to strings.scm.Munyoki Kilyungi
2023-11-22"Add special-case for blank Chr field".Munyoki Kilyungi
2023-11-22Construct URIs for external data in RDF ProbeSet transform.Munyoki Kilyungi
2023-11-22Add extra joins for GeneList and GeneList_rn33.Munyoki Kilyungi
2023-11-22Delete some RDF prefixes when transforming ProbeSet metadata.Munyoki Kilyungi
2023-11-22Add 'lower-case-and-replace-spaces' functionMunyoki Kilyungi
2023-11-22Remove unused properties during ProbeSet RDF transform.Munyoki Kilyungi
2023-11-22Add Species join when during RDF ProbeSet transform.Munyoki Kilyungi
2023-11-21Add extra gnt:location term when transforming ProbeSet metadata.Munyoki Kilyungi
2023-11-21Add strand position when transforming ProbeSet metadata.Munyoki Kilyungi
2023-11-21Delete un-necessary predicates from ProbeSet transform.Munyoki Kilyungi
2023-11-20Add "gnt:belongsToSpecies" and "gnt:belongsToGroup" gn terms.Munyoki Kilyungi
2023-11-17Remove "FamilyOrder" join when transforming Species table.Munyoki Kilyungi
2023-11-17Capitalize InbredSetName id's consistently.Munyoki Kilyungi
2023-11-17Make species identifiers consistent.Munyoki Kilyungi
2023-11-17Revert "Make Phenotypy InbredSet classification consistent."Munyoki Kilyungi
2023-11-17Make Phenotypy InbredSet classification consistent.Munyoki Kilyungi
2023-10-20Use the correct URL for "gnt:" prefix.Munyoki Kilyungi
2023-10-20Alias Publication.Id to PublicationIdMunyoki Kilyungi
2023-10-19Use InbredSetCode instead of Name when creating a trait name.Munyoki Kilyungi
2023-10-19Check (Publish/Geno)Freeze for InbredSet if NULL in InfoFiles.Munyoki Kilyungi
2023-10-19Remove un-necessary WHERE clause when dumping phenotypes.Munyoki Kilyungi
2023-10-19Add missing xkos prefix in phenotype dump.Munyoki Kilyungi