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gn-transform-databases
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Data transformers for GeneNetwork (particularly to RDF)
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Author
2022-10-30
Import GeneRIF data into RDF.
Arun Isaac
2022-10-30
Move triple utilities to new module.
Arun Isaac
2022-10-30
Move string-blank? to (dump utils).
Arun Isaac
2022-10-30
Special case Yohan Bossé's last name.
Arun Isaac
2022-10-30
Do not deduplicate the AvgMethod table.
Arun Isaac
2022-10-21
Authenticate when deleting graph from virtuoso.
Arun Isaac
2022-08-20
Add gn:traitId and gn:publicationId.
Munyoki Kilyungi
2022-08-02
Add new functions to read CSV files in a flexible way.
Munyoki Kilyungi
2022-06-24
Try uploading twice into virtuoso.
Arun Isaac
2022-06-24
Delete vertical tab character in publication abstracts.
Arun Isaac
2022-06-23
Add gitignore.
Arun Isaac
2022-06-23
Dump groups.
BonfaceKilz
2022-06-23
Dump case-attributes.
BonfaceKilz
2022-06-23
Remove "." if it occurs at the end of a turtle identifier.
BonfaceKilz
2022-05-05
Document source compilation.
Arun Isaac
2022-05-05
Makefile: Disable auto-compilation while compiling.
Arun Isaac
2022-05-05
Compile scheme sources.
Arun Isaac
2022-05-05
manifest: Add gnu-make.
Arun Isaac
2022-05-05
Validate dumped RDF using rapper.
Arun Isaac
2022-05-05
README: Advertise continuous integration build artifacts.
Arun Isaac
2022-05-05
README: Document loading RDF and visualizing schema.
Arun Isaac
2022-05-05
Prefix SQL connection parameters with sql-.
Arun Isaac
2022-05-05
README: Replace org mode with markdown.
Arun Isaac
2022-05-05
README: Link to genenetwork.org CI.
Arun Isaac
2022-05-05
README: Add CI badges.
Arun Isaac
2022-05-04
Read SPARQL connection settings from file.
Arun Isaac
2022-05-04
Import guile-hashing in manifest.
Arun Isaac
2022-05-04
Add script to load RDF into virtuoso.
Arun Isaac
2022-05-04
Special case investigator ID for "Yohan Bossé".
Arun Isaac
2022-04-15
pre-inst-env: Rename prepend-path-env! to prepend-path-environment!.
Arun Isaac
2022-03-10
Ignore 0th command-line argument.
Arun Isaac
2022-03-10
Accept connection parameters and dump directory as arguments.
Arun Isaac
2022-03-10
Rename the delete verb of map-alist to remove.
Arun Isaac
2022-03-10
Work around broken upstream guile-sparql package.
Arun Isaac
2022-03-10
Remove guix: prefix from guile-libyaml.
Arun Isaac
2022-03-10
Use run64 to run tests.
Arun Isaac
2022-03-10
Add Makefile.
Arun Isaac
2022-03-10
Allow tabs in Makefiles.
Arun Isaac
2022-03-09
Rename guix.scm to manifest.scm.
Arun Isaac
2022-01-04
Eval macro helper functions at macro expansion time.
Arun Isaac
2021-12-27
BUGS: Add "Dump table and field annotations to RDF" bug.
Arun Isaac
2021-12-24
Make visualize-schema executable.
Arun Isaac
2021-12-24
README: Execute dump.scm directly without invoking guile.
Arun Isaac
2021-12-24
Add pre-inst-env.
Arun Isaac
2021-12-24
Do not add to load path in script.
Arun Isaac
2021-12-24
README: Add Using section.
Arun Isaac
2021-12-24
README: Add Contributing section.
Arun Isaac
2021-12-24
BUGS: Add table size estimates bug.
Arun Isaac
2021-12-24
BUGS: Add bug tracker.
Arun Isaac
2021-12-24
Visualize RDF schema.
Arun Isaac
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