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| author | Munyoki Kilyungi | 2026-01-23 19:44:07 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2026-01-23 19:44:07 +0300 |
| commit | a9f6bc3bc0ebe5a8cdcc4c9b3f20a6a722a55dd0 (patch) | |
| tree | 1216332510575494998e5df806793c9263ff4b97 /examples | |
| parent | 68e3fbce7c128708474199d1e181593834615b39 (diff) | |
| download | gn-transform-databases-a9f6bc3bc0ebe5a8cdcc4c9b3f20a6a722a55dd0.tar.gz | |
Update Mapping/Averaging methods ontology.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'examples')
| -rwxr-xr-x | examples/strains.scm | 20 |
1 files changed, 12 insertions, 8 deletions
diff --git a/examples/strains.scm b/examples/strains.scm index cb4978f..3e86361 100755 --- a/examples/strains.scm +++ b/examples/strains.scm @@ -77,23 +77,27 @@ At this point it is not very clear how Name, Name2, Symbol and Alias are used. (define-transformer mapping-method (tables (MappingMethod)) (schema-triples - (gnc:mapping_method a skos:Concept) - (gnc:mapping_method skos:definition "Terms that decribe mapping methods used on this resource")) + (gnc:mapping_method a skos:ConceptScheme) + (gnc:mapping_method skos:prefLabel "Mapping Method Vocabulary") + (gnc:mapping_method skos:definition "Controlled vocabulary describing statistical/computational methods used for mapping in GeneNetwork.")) (triples (string->identifier "mapping_method" (field MappingMethod Name) #:separator "_") - (set rdf:type 'gnc:mapping_method) - (set rdfs:label (field MappingMethod Name)))) + (set a 'skos:Concept) + (set skos:inScheme 'gnc:mapping_method) + (set skos:prefLabel (field MappingMethod Name)))) (define-transformer avg-method ;; The Name and Normalization fields seem to be the same. Dump only ;; the Name field. (tables (AvgMethod)) (schema-triples - (gnc:avg_method a skos:Concept) - (gnc:avg_method skos:definition "Terms that decribe normalization methods used on this resource")) + (gnc:avg_method a skos:ConceptScheme) + (gnc:avg_method skos:prefLabel "Normalization and Averaging Method Vocabulary" ;) + (gnc:avg_method skos:definition "Controlled vocabulary describing normalization, transformation, and summarization methods applied in GeneNetwork.")) (triples (string->identifier "avg_method" (field AvgMethod Name AvgMethodName) #:separator "_") - (set rdf:type 'gnc:avg_method) - (set rdfs:label (field AvgMethod Normalization)))) + (set a skos:Concept) + (set skos:inScheme gnc:avg_method) + (set prefLabel (field AvgMethod Normalization)))) |