From af4ef6c524776413e2b1b1ec7f4806a114b11630 Mon Sep 17 00:00:00 2001 From: Munyoki Kilyungi Date: Tue, 21 Nov 2023 15:39:42 +0300 Subject: Delete un-necessary predicates from ProbeSet transform. Signed-off-by: Munyoki Kilyungi --- examples/probeset.scm | 19 ------------------- 1 file changed, 19 deletions(-) diff --git a/examples/probeset.scm b/examples/probeset.scm index 273c635..6fb34fe 100755 --- a/examples/probeset.scm +++ b/examples/probeset.scm @@ -24,20 +24,14 @@ (gnt:targetsRegion rdfs:domain gnc:Probeset) (gnt:chr rdfs:domain gnc:Probeset) (gnt:mb rdfs:domain gnc:Probeset) - (gnt:mbMm8 rdfs:domain gnc:Probeset) - (gnt:mb2016 rdfs:domain gnc:Probeset) (gnt:hasSpecificity a owl:ObjectProperty) (gnt:hasSpecificity rdfs:domain gnc:Probeset) (gnt:hasBlatScore a owl:ObjectProperty) (gnt:hasBlatScore rdfs:domain gnc:Probeset) (gnt:hasBlatMbStart a owl:ObjectProperty) (gnt:hasBlatMbStart rdfs:domain gnc:Probeset) - (gnt:hasBlatMbStart2016 a owl:ObjectProperty) - (gnt:hasBlatMbStart2016 rdfs:domain gnc:Probeset) (gnt:hasBlatMbEnd a owl:ObjectProperty) (gnt:hasBlatMbEnd rdfs:domain gnc:Probeset) - (gnt:hasBlatMbEnd2016 a owl:ObjectProperty) - (gnt:hasBlatMbEnd2016 rdfs:domain gnc:Probeset) (gnt:hasBlatSeq a owl:ObjectProperty) (gnt:hasBlatSeq rdfs:domain gnc:Probeset) (gnt:hasTargetSeq a owl:ObjectProperty) @@ -85,11 +79,6 @@ Probe_set_target_region)))) (set gnt:chr (field ProbeSet Chr)) (set gnt:mb (annotate-field (field ("IFNULL(ProbeSet.Mb, '')" Mb)) '^^xsd:double)) - (set gnt:mbMm8 (annotate-field (field ("IFNULL(ProbeSet.Mb_mm8, '')" Mb_mm8)) - '^^xsd:double)) - (set gnt:mb2016 - (annotate-field (field ("IFNULL(ProbeSet.Mb_2016, '')" Mb_2016)) - '^^xsd:double)) (set gnt:hasSpecificity (field ("IFNULL(ProbeSet.Probe_set_specificity, '')" Probe_set_specificity))) @@ -100,18 +89,10 @@ (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start, '')" Probe_set_Blat_Mb_start)) '^^xsd:double)) - (set gnt:hasBlatMbStart2016 - (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start_2016, '')" - Probe_set_Blat_Mb_start_2016)) - '^^xsd:double)) (set gnt:hasBlatMbEnd (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_end, '')" Probe_set_Blat_Mb_end)) '^^xsd:double)) - (set gnt:hasBlatMbEnd2016 - (annotate-field (field ("IFNULL(ProbeSet.Probe_set_Blat_Mb_start_2016, '')" - Probe_set_Blat_Mb_start_2016)) - '^^xsd:double)) (set gnt:hasBlatSeq (sanitize-rdf-string (field ProbeSet BlatSeq))) (set gnt:hasTargetSeq (sanitize-rdf-string (field ProbeSet TargetSeq))) (set gnt:hasHomologeneId (ontology 'homologene: -- cgit v1.2.3