Update how symbols from GeneRIF_BASIC are transformed

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>

1 files changed, 9 insertions, 7 deletions

diff --git a/examples/generif.scm b/examples/generif.scm
index d25b0f1..d6b8b25 100755
--- a/examples/generif.scm
+++ b/examples/generif.scm
@@ -46,19 +46,21 @@
            (left-join Species "USING (SpeciesId)"))
           "GROUP BY GeneId ORDER BY BINARY symbol")
   (schema-triples
-   (gnt:symbol rdfs:domain gn-term:geneWikiEntry)
-   (gnt:wikiEntryOfSpecies rdfs:range gn:species)
-   (gnt:taxid rdfs:domain gn-term:geneWikiEntry))
+   (gnt:belongsToSpecies rdfs:domain gnc:strain)
+   (gnt:belongsToSpecies rdfs:domain gnc:NCBIWikiEntry)
+   (gnt:symbol rdfs:domain gnc:NCBIWikiEntry))
   (triples (ontology 'generif: (field GeneRIF_BASIC GeneId))
     (multiset gnt:symbol (string-split (field ("GROUP_CONCAT(DISTINCT symbol)" symbol))
                                        #\,))
-    (multiset gnt:wikiEntryOfSpecies
+    (multiset gnt:belongsToSpecies
               (string-split
                (field ("GROUP_CONCAT(DISTINCT Species.SpeciesName)" species))
                #\,))
-    (multiset gnt:taxId (map (cut ontology 'ncbiTaxon: <>)
-                             (string-split (field ("GROUP_CONCAT(DISTINCT TaxID)" taxId))
-                                           #\,)))))
+    (multiset dct:relation
+              (map
+               (cut ontology 'ncbiTaxon: <>)
+               (string-split (field ("GROUP_CONCAT(DISTINCT TaxID)" taxId))
+                             #\,)))))
 
 (define-transformer gn-genewiki-entries
   (tables (GeneRIF