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| author | Efraim Flashner | 2021-08-15 09:57:30 +0000 |
|---|---|---|
| committer | Shepherd | 2021-08-15 09:57:30 +0000 |
| commit | b3c96077c2ae3ebda05eb53d81fa6e377a55132d (patch) | |
| tree | 17fcd3950c44856fdb2736e486674d94e5199d7e /run_genecup.sh | |
| parent | 663f6ef7a49dfd85d4bda075d73f361970f2fd7d (diff) | |
| download | gn-shepherd-services-b3c96077c2ae3ebda05eb53d81fa6e377a55132d.tar.gz | |
genecup: update service.
Diffstat (limited to 'run_genecup.sh')
| -rwxr-xr-x | run_genecup.sh | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/run_genecup.sh b/run_genecup.sh index bfe90de..12f2169 100755 --- a/run_genecup.sh +++ b/run_genecup.sh @@ -1,2 +1,6 @@ #!/bin/sh -$(/home/shepherd/guix-profiles/genecup/bin/guix system container -L /home/shepherd/guix-past/modules/ -L /home/shepherd/guix-bioinformatics/ /home/shepherd/guix-bioinformatics/gn/services/genecup-container.scm --network --share=/export2/PubMed=/export2/PubMed --share=/export/ratspub=/export/ratspub) +cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native) +export EDIRECT_PUBMED_MASTER=/export2/PubMed +export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt +export TMPDIR=/export/ratspub/tmp +/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py |