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| author | Shepherd on Tux02 | 2024-06-20 10:52:12 -0500 |
|---|---|---|
| committer | Shepherd on Tux02 | 2024-06-20 10:52:12 -0500 |
| commit | 168f7d9b645f132cf4d9ce885e4c466be7d328e1 (patch) | |
| tree | 7b560c48cfdb38fba37c939ec584e2d9c10e4f91 /run_genecup.sh | |
| parent | 7983318936c65f2af0c079414a0be9d7f7af0fcc (diff) | |
| download | gn-shepherd-services-168f7d9b645f132cf4d9ce885e4c466be7d328e1.tar.gz | |
genecup runner
Diffstat (limited to 'run_genecup.sh')
| -rwxr-xr-x | run_genecup.sh | 11 |
1 files changed, 6 insertions, 5 deletions
diff --git a/run_genecup.sh b/run_genecup.sh index f9d4de1..ea43a0d 100755 --- a/run_genecup.sh +++ b/run_genecup.sh @@ -6,9 +6,10 @@ export TMPDIR=/export/ratspub/tmp export NLTK_DATA=/export2/PubMed/nltk_data # This version for the genecup guix profile which includes guix-bioinformatics, using genecup-channels.scm. -/home/shepherd/guix-profiles/genecup/bin/guix environment --no-grafts genecup-with-tensorflow-native -- /home/shepherd/guix-profiles/genecup/bin/guix build --no-grafts genecup-with-tensorflow-native --cores=4 -cd $(/home/shepherd/guix-profiles/genecup/bin/guix build genecup-with-tensorflow-native) -/home/shepherd/guix-profiles/genecup/bin/guix environment --ad-hoc genecup-with-tensorflow-native -- ./server.py +# shepherd@tux02:~/services/genecup$ ./guix/bin/guix build -L ~/services/genecup/guix-past/modules -L ~/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native -c 24 -M 8 + +cd /home/shepherd/services/genecup +cd $(/home/shepherd/services/genecup/guix/bin/guix build -L /home/shepherd/services/genecup/guix-past/modules -L /home/shepherd/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native -c 4) + +/home/shepherd/services/genecup/guix/bin/guix shell -L /home/shepherd/services/genecup/guix-past/modules -L /home/shepherd/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native -- ./server.py -#cd $(/home/shepherd/guix-profiles/genecup/bin/guix build -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics genecup-with-tensorflow-native) -#/home/shepherd/guix-profiles/genecup/bin/guix environment -L /home/shepherd/guix-past/modules -L /home/shepherd/guix-bioinformatics --ad-hoc genecup-with-tensorflow-native -- ./server.py |