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| author | Shepherd on Tux02 | 2024-06-23 04:38:43 -0500 |
|---|---|---|
| committer | Shepherd on Tux02 | 2024-06-23 04:38:43 -0500 |
| commit | c559e13f2374f676d7c838e8bac959e45c850ae7 (patch) | |
| tree | c22bfad7e4bfc98654ecbee24037d13e75a86840 | |
| parent | 168f7d9b645f132cf4d9ce885e4c466be7d328e1 (diff) | |
| download | gn-shepherd-services-master.tar.gz | |
| -rwxr-xr-x | run_genecup.sh | 3 |
1 files changed, 1 insertions, 2 deletions
diff --git a/run_genecup.sh b/run_genecup.sh index ea43a0d..8d57704 100755 --- a/run_genecup.sh +++ b/run_genecup.sh @@ -1,7 +1,6 @@ #!/bin/sh export EDIRECT_PUBMED_MASTER=/export2/PubMed -export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt export TMPDIR=/export/ratspub/tmp export NLTK_DATA=/export2/PubMed/nltk_data @@ -11,5 +10,5 @@ export NLTK_DATA=/export2/PubMed/nltk_data cd /home/shepherd/services/genecup cd $(/home/shepherd/services/genecup/guix/bin/guix build -L /home/shepherd/services/genecup/guix-past/modules -L /home/shepherd/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native -c 4) -/home/shepherd/services/genecup/guix/bin/guix shell -L /home/shepherd/services/genecup/guix-past/modules -L /home/shepherd/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native -- ./server.py +/home/shepherd/services/genecup/guix/bin/guix shell -C -N --expose=/etc/ssl/certs --expose=$EDIRECT_PUBMED_MASTER --share=$TMPDIR -L /home/shepherd/services/genecup/guix-past/modules -L /home/shepherd/services/genecup/guix-bioinformatics genecup-latest-with-tensorflow-native coreutils-minimal -- env TMPDIR=$TMPDIR EDIRECT_PUBMED_MASTER=$EDIRECT_PUBMED_MASTER NLTK_DATA=$NLTK_DATA ./server.py |