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Guix configuration for genenetwork machines
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genenetwork-development.scm
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Author
2023-12-19
Use guix-channel-job-gexp for gn-auth pylint and mypy CI jobs.
Arun Isaac
2023-12-19
Use guix-channel-job-gexp for genenetwork3 pylint and mypy CI jobs.
Arun Isaac
2023-12-19
Delete unused genenetwork3-unit-tests variable.
Arun Isaac
2023-12-19
Remove qc-project.
Arun Isaac
2023-12-19
Rebuild xapian index every hour.
Arun Isaac
2023-12-19
Trigger xapian index rebuild conditionally.
Arun Isaac
2023-11-13
Allow http transport for proxied app
Frederick Muriuki Muriithi
2023-11-13
GN Secrets: Set up secrets files for GN2 and GN3
Frederick Muriuki Muriithi
2023-11-10
auth: define setting for CI/CD auth.
Frederick Muriuki Muriithi
2023-11-10
Update domain for CD auth service.
Frederick Muriuki Muriithi
2023-11-02
Secrets: Add instance folder to pola-wrapper.
Frederick Muriuki Muriithi
2023-11-02
SECRETS: Fix secrets path.
Frederick Muriuki Muriithi
2023-11-02
Secrets: Setup gn-auth instance path to find the secrets.
Frederick Muriuki Muriithi
2023-11-02
gn-auth: restart GN2 also after any changes to gn-auth.
Frederick Muriuki Muriithi
2023-11-02
gn-auth: Remove automated migrations.
Frederick Muriuki Muriithi
2023-10-28
Do not use upstream Guix in CI jobs.
Arun Isaac
2023-10-05
Fix guix-bioinformatics path in project definition.
Arun Isaac
2023-10-05
Fix typo in comment about cloning the latest gn-auth repository.
Arun Isaac
2023-10-05
Construct yoyo.ini using guile-ini.
Arun Isaac
2023-10-04
Use guix-bioinformatics repository on tux02.
Arun Isaac
2023-10-04
Import gn-auth from (gn packages genenetwork).
Arun Isaac
2023-10-04
Import python-mypy from (gnu packages python).
Arun Isaac
2023-10-04
Use switch-symlinks from (guix build utils).
Arun Isaac
2023-09-28
Use upstream mypy.
Munyoki Kilyungi
2023-09-27
Revert "Set the envvar in the gexp"
Frederick Muriuki Muriithi
2023-09-27
Revert "Expose configurations directory to pola-wrapper."
Frederick Muriuki Muriithi
2023-09-27
Revert "Expose config file to pola-wrapper"
Frederick Muriuki Muriithi
2023-09-20
Expose config file to pola-wrapper
Frederick Muriuki Muriithi
2023-09-20
Expose configurations directory to pola-wrapper.
Frederick Muriuki Muriithi
2023-09-20
Set the envvar in the gexp
Frederick Muriuki Muriithi
2023-09-20
Pass "secrets" configurations to GN2
Frederick Muriuki Muriithi
2023-09-19
Use appropriate mypy for Python3.10
Frederick Muriuki Muriithi
2023-09-19
Add missing `gn-auth-repository` configuration
Frederick Muriuki Muriithi
2023-09-16
Add CI/CD definitions for gn-auth
Frederick Muriuki Muriithi
2023-09-11
sed /s/dump-genenetwork/transform-genenetwork/g.
Munyoki Kilyungi
2023-09-11
sed /s/dump-genenetwork/transform-genenetwork/g.
Munyoki Kilyungi
2023-09-11
Update the repo-url for transforming genenetwork databases.
Munyoki Kilyungi
2023-09-05
Use correct name for python-mypy
Munyoki Kilyungi
2023-09-05
Use mypy defined in guix-bioinformatics
Munyoki Kilyungi
2023-09-04
Use self-hosted git repo
Munyoki Kilyungi
2023-09-04
Use self-hosted GN repository
Munyoki Kilyungi
2023-08-10
Set up cgit service.
Arun Isaac
2023-08-10
Switch to the forge-nginx and ACME services.
Arun Isaac
2023-07-19
Use tissue from guix-forge.
Arun Isaac
2023-07-19
Disable verbose build logs for guix-bioinformatics job.
Arun Isaac
2023-07-19
Use guix-channel-job-gexp for genenetwork3 tests.
Arun Isaac
2023-07-19
Add guix-bioinformatics CI job.
Arun Isaac
2023-07-11
Revert "Disable tests"
Munyoki Kilyungi
2023-07-10
Revert "Fix genotype file path"
Munyoki Kilyungi
2023-07-10
Fix genotype file path
Munyoki Kilyungi
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