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Guix configuration for genenetwork machines
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genenetwork-development.scm
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Author
2024-06-19
Replace tabs with white spaces.
Munyoki Kilyungi
2024-06-19
Move xapian re-indexing checks into the indexing script.
Munyoki Kilyungi
2024-06-17
Configure CI for guile-lapack.
Arun Isaac
2024-06-17
Configure CI for guile-gsl.
Arun Isaac
2024-05-02
Mount llm-db-path into genenetwork3 container.
Arun Isaac
2024-04-28
Add llm-db-path for CD.
Alexander_Kabui
2024-04-26
gn-auth: Use new entry-point script.
Frederick Muriuki Muriithi
2024-04-26
Set up SSL keys for CI/CD for gn2 and gn-auth
Frederick Muriuki Muriithi
2024-04-26
gn-auth: Update repository URL
Frederick Muriuki Muriithi
2024-03-11
Infer profile from guix executable used to build container.
Arun Isaac
2024-03-06
Move CI/CD configurations from ENVVARS into a file.
Frederick Muriuki Muriithi
2024-03-05
Pass on the request scheme to GN2 app
Frederick Muriuki Muriithi
2024-02-29
Bump copyright year for Fred.
Arun Isaac
2024-02-29
Do not hard-code GN_AUTH_SECRETS.
Arun Isaac
2024-02-28
Set up correct secrets file for gn-auth
Frederick Muriuki Muriithi
2024-02-16
Run genenetwork auth CD with 8 workers.
Arun Isaac
2024-02-16
Run genenetwork3 CD with 8 workers.
Arun Isaac
2024-01-29
Update module path in launch of mechanical-rob.
Frederick Muriuki Muriithi
2024-01-18
Configure CI for guile-lmdb.
Arun Isaac
2024-01-18
Fix channel name on transform-genenetwork-database channel.
Arun Isaac
2024-01-08
Increase gunicorn timeout for genenetwork3.
Arun Isaac
2024-01-05
Set ownership and permissions on secret files.
Arun Isaac
2024-01-05
Abstract out gn2/gn3 secrets as configuration fields.
Arun Isaac
2024-01-02
Change path to default genenetwork2 settings file.
Arun Isaac
2023-12-30
Delete unused qc-tests and qc-project.
Arun Isaac
2023-12-30
Separate out guix-bioinformatics job that builds all packages.
Arun Isaac
2023-12-21
Simple gn-guile system container builds
Pjotr Prins
2023-12-20
Use local gn-transform-databases git repository.
Arun Isaac
2023-12-20
Use guix-channel-job-gexp for gn-transform-databases CI job.
Arun Isaac
2023-12-19
Delete unused qc-tests variable.
Arun Isaac
2023-12-19
Use guix-channel-job-gexp for gn-auth pylint and mypy CI jobs.
Arun Isaac
2023-12-19
Use guix-channel-job-gexp for genenetwork3 pylint and mypy CI jobs.
Arun Isaac
2023-12-19
Delete unused genenetwork3-unit-tests variable.
Arun Isaac
2023-12-19
Remove qc-project.
Arun Isaac
2023-12-19
Rebuild xapian index every hour.
Arun Isaac
2023-12-19
Trigger xapian index rebuild conditionally.
Arun Isaac
2023-11-13
Allow http transport for proxied app
Frederick Muriuki Muriithi
2023-11-13
GN Secrets: Set up secrets files for GN2 and GN3
Frederick Muriuki Muriithi
2023-11-10
auth: define setting for CI/CD auth.
Frederick Muriuki Muriithi
2023-11-10
Update domain for CD auth service.
Frederick Muriuki Muriithi
2023-11-02
Secrets: Add instance folder to pola-wrapper.
Frederick Muriuki Muriithi
2023-11-02
SECRETS: Fix secrets path.
Frederick Muriuki Muriithi
2023-11-02
Secrets: Setup gn-auth instance path to find the secrets.
Frederick Muriuki Muriithi
2023-11-02
gn-auth: restart GN2 also after any changes to gn-auth.
Frederick Muriuki Muriithi
2023-11-02
gn-auth: Remove automated migrations.
Frederick Muriuki Muriithi
2023-10-28
Do not use upstream Guix in CI jobs.
Arun Isaac
2023-10-05
Fix guix-bioinformatics path in project definition.
Arun Isaac
2023-10-05
Fix typo in comment about cloning the latest gn-auth repository.
Arun Isaac
2023-10-05
Construct yoyo.ini using guile-ini.
Arun Isaac
2023-10-04
Use guix-bioinformatics repository on tux02.
Arun Isaac
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