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| author | Frederick Muriuki Muriithi | 2023-04-04 10:12:31 +0300 |
|---|---|---|
| committer | Arun Isaac | 2023-04-11 15:43:43 +0100 |
| commit | d5ab690290f739af95856306246ab0891db43325 (patch) | |
| tree | b72ab2913933a495bfaafcefef3de748faec0b65 /genenetwork-development.scm | |
| parent | d968a5bbb969a3032f4460afcb294e4672dc5aa6 (diff) | |
| download | gn-machines-d5ab690290f739af95856306246ab0891db43325.tar.gz | |
Provide MySQL URI to the xapian indexing script.
* genenetwork-development.scm (build-xapian-index-gexp): Provide MySQL
URI to the xapian indexing script.
Diffstat (limited to 'genenetwork-development.scm')
| -rw-r--r-- | genenetwork-development.scm | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/genenetwork-development.scm b/genenetwork-development.scm index 688d02f..44814d5 100644 --- a/genenetwork-development.scm +++ b/genenetwork-development.scm @@ -1,6 +1,6 @@ ;;; genenetwork-machines --- Guix configuration for genenetwork machines ;;; Copyright © 2022 Arun Isaac <arunisaac@systemreboot.net> -;;; Copyright © 2022 Frederick Muriuki Muriithi <fredmanglis@gmail.com> +;;; Copyright © 2022, 2023 Frederick Muriuki Muriithi <fredmanglis@gmail.com> ;;; ;;; This file is part of genenetwork-machines. ;;; @@ -239,7 +239,8 @@ genenetwork3 source from the latest commit of @var{project}." (lambda () ;; Build xapian index. (setenv "PYTHONPATH" (getcwd)) - (invoke "./scripts/index-genenetwork" xapian-build-directory) + (invoke "./scripts/index-genenetwork" xapian-build-directory + "mysql://webqtlout:webqtlout@localhost/db_webqtl") ;; Stop genenetwork3, replace old xapian index and ;; start genenetwork3. (dynamic-wind |