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authorBonface2024-02-09 09:41:28 -0600
committerMunyoki Kilyungi2024-08-09 13:30:43 +0300
commitd029d5d7f8ead1f1de8d318045004a4a6f68f5fb (patch)
tree33c7ff40e3f953d030ed08f468f7afb1dfcba9e6 /general/datasets/LVF2_M_0704_R/platform.rtf
parent769ff7825f5d8d36d541e90534c07f1985899973 (diff)
downloadgn-docs-d029d5d7f8ead1f1de8d318045004a4a6f68f5fb.tar.gz
Update dataset RTF Files.
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+<blockquote>
+<p><strong>Affymetrix Mouse Genome 430A and 430B array pairs: </strong>The <a class="fs14" href="http://www.affymetrix.com/support/technical/byproduct.affx?product=moe430-20" target="_blank">430A and B</a> array pairs collectively consist of 992936 25-nucleotide probes that estimate the expression of approximately 39,000 transcripts (some are variant transcipts and many are duplicates). The array sequences were selected late in 2002 using Unigene Build 107. The arrays nominally contain the same probe sequence as the 430 2.0 series. However, roughy 75000 probes differ between those on A and B arrays and those on the 430 2.0.</p>
+</blockquote>
+
+<blockquote>Liver samples were assayed individually using 60 M430A and B Affymetrix oligonucleotide microarray pairs. Each array ID is denoted by a 10-letter code: the first three letters represent the F<sub>2</sub>-ob/ob mouse ID number, the fourth letter (either A or B) denotes M430A or M430B arrays, and the last six letters represent the date the array was scanned (MMDDYY).</blockquote>
+
+<blockquote>All 120 M430A and B arrays used in this project were purchased at one time and had the same Affymetrix lot number. The table below lists the arrays by Animal ID, sex, and ArrayID.</blockquote>
+
+<blockquote>
+<table align="Center" border="1" cellpadding="0" cellspacing="0" style="width:75%">
+ <tbody>
+ <tr>
+ <td>
+ <table border="1" cellpadding="5" cellspacing="1" style="width:100%">
+ <tbody>
+ <tr>
+ <td>
+ <p>Animal ID</p>
+ </td>
+ <td>
+ <p>sex</p>
+ </td>
+ <td>
+ <p>MOE430A ArrayID</p>
+ </td>
+ <td>
+ <p>MOE430B ArrayID</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>2</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>002A100203</p>
+ </td>
+ <td>
+ <p>002B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>12</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>012A100203</p>
+ </td>
+ <td>
+ <p>012B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>22</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>022A100203</p>
+ </td>
+ <td>
+ <p>022B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>44</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>044A100203</p>
+ </td>
+ <td>
+ <p>044B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>46</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>046A100203</p>
+ </td>
+ <td>
+ <p>046B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>61</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>061A100203</p>
+ </td>
+ <td>
+ <p>061B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>100</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>100A100303</p>
+ </td>
+ <td>
+ <p>100B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>105</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>105A100303</p>
+ </td>
+ <td>
+ <p>105B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>111</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>111A100303</p>
+ </td>
+ <td>
+ <p>111B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>123</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>123A100303</p>
+ </td>
+ <td>
+ <p>123B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>156</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>156A100303</p>
+ </td>
+ <td>
+ <p>156B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>165</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>165A100303</p>
+ </td>
+ <td>
+ <p>165B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>167</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>167A100303</p>
+ </td>
+ <td>
+ <p>167B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>173</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>173A100303</p>
+ </td>
+ <td>
+ <p>173B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>186</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>186A100203</p>
+ </td>
+ <td>
+ <p>186B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>190</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>190A100303</p>
+ </td>
+ <td>
+ <p>190B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>194</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>194A100303</p>
+ </td>
+ <td>
+ <p>194B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>200</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>200A100303</p>
+ </td>
+ <td>
+ <p>200B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>207</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>207A100303</p>
+ </td>
+ <td>
+ <p>207B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>209</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>209A100203</p>
+ </td>
+ <td>
+ <p>209B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>212</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>212A100303</p>
+ </td>
+ <td>
+ <p>212B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>223</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>223A100303</p>
+ </td>
+ <td>
+ <p>223B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>224</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>224A100303</p>
+ </td>
+ <td>
+ <p>224B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>253</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>253A100303</p>
+ </td>
+ <td>
+ <p>253B100503</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>254</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>254A100603</p>
+ </td>
+ <td>
+ <p>254B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>260</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>260A100603</p>
+ </td>
+ <td>
+ <p>260B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>264</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>264A100603</p>
+ </td>
+ <td>
+ <p>264B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>310</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>310A100603</p>
+ </td>
+ <td>
+ <p>310B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>317</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>317A100603</p>
+ </td>
+ <td>
+ <p>317B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>318</p>
+ </td>
+ <td>
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+ </td>
+ <td>
+ <p>318A100603</p>
+ </td>
+ <td>
+ <p>318B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>324</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>324A100603</p>
+ </td>
+ <td>
+ <p>324B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>327</p>
+ </td>
+ <td>
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+ </td>
+ <td>
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+ </td>
+ <td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>343</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
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+ </td>
+ <td>
+ <p>343B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>416</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>416A100603</p>
+ </td>
+ <td>
+ <p>416B100703</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
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+ </td>
+ <td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
+ <td>
+ <p>M</p>
+ </td>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
+ <td>
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+ </td>
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+ </td>
+ <td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>455</p>
+ </td>
+ <td>
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+ </td>
+ <td>
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+ </td>
+ <td>
+ <p>455B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
+ </tr>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
+ <td>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
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+ </td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
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+ </td>
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+ </td>
+ <td>
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+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>560</p>
+ </td>
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+ </td>
+ <td>
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+ </td>
+ <td>
+ <p>560B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>566</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
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+ </td>
+ <td>
+ <p>566B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>608</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>608A100703</p>
+ </td>
+ <td>
+ <p>608B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>615</p>
+ </td>
+ <td>
+ <p>F</p>
+ </td>
+ <td>
+ <p>615A100703</p>
+ </td>
+ <td>
+ <p>615B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>617</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>617A100703</p>
+ </td>
+ <td>
+ <p>617B100803</p>
+ </td>
+ </tr>
+ <tr>
+ <td>
+ <p>620</p>
+ </td>
+ <td>
+ <p>M</p>
+ </td>
+ <td>
+ <p>620A100703</p>
+ </td>
+ <td>
+ <p>620B100803</p>
+ </td>
+ </tr>
+ </tbody>
+ </table>
+ </td>
+ </tr>
+ </tbody>
+</table>
+</blockquote>
generated by cgit v1.2.3 (git 2.44.0) at 2024-09-19 21:51:27 +0000