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authorPjotr Prins2023-06-28 18:32:50 +0200
committerPjotr Prins2023-06-28 18:32:50 +0200
commit55a96a22c63ba28d2d7f66a9605a3ed616e9f8a5 (patch)
tree182a1d92a7a1cba24e954b796669d0db1b9c64e8
parent7427d89cefcaa9479cf6182c0a19b1393791d32b (diff)
downloadgn-docs-55a96a22c63ba28d2d7f66a9605a3ed616e9f8a5.tar.gz
Added search query
-rw-r--r--api/questions-to-ask-GN.md39
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@@ -352,7 +352,44 @@ curl -s "https://genenetwork.org/api/v_pre1/correlation?trait_id=1427571_at&db=H
## Return datasets are relevant to diabetes?
-TBD
+```
+curl -s "https://genenetwork.org/api3/api/search/?query=diabetes&per_page=2&type=phenotype"
+[
+ {
+ "authors": [
+ "Gerling",
+ "I"
+ ],
+ "dataset": "Islets-GerlingPublish",
+ "dataset_fullname": "Islets-Gerling Phenotypes",
+ "description": "Cofactor, metadata: Cohort (0=control, 1=AB+, 2=type 1 diabetes, 3=type 2 diabetes) [cohort]",
+ "group": "Islets-Gerling",
+ "mean": 1.3103448275862069,
+ "name": "10003",
+ "species": "human",
+ "year": 2017
+ },
+ {
+ "additive": 1.28571428571429,
+ "authors": [
+ "Weerasekera S",
+ "Morahan G"
+ ],
+ "dataset": "BXDPublish",
+ "dataset_fullname": "BXD Published Phenotypes",
+ "description": "Metabolism, pancreas, visual system: Diabetes model, alloxan response (80 mg/kg iv to induce diabetes by killing pancretic beta cells), retinopathy severity score, males and females from 7 to 17 weeks of age [ordinal scale, 1=normal, 2=slight retinopathy, 3=moderate, 4=severe retinopathy]",
+ "geno_chr": "6",
+ "geno_mb": 3.266392,
+ "group": "BXD",
+ "inbredsetcode": "BXD",
+ "lrs": 22.082744135228,
+ "mean": 2.8333333333333335,
+ "name": "15958",
+ "species": "mouse",
+ "year": 2012
+ }
+]
+```
## What phenotypes do we have for a certain dataset?