From 55a96a22c63ba28d2d7f66a9605a3ed616e9f8a5 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 28 Jun 2023 18:32:50 +0200 Subject: Added search query --- api/questions-to-ask-GN.md | 39 ++++++++++++++++++++++++++++++++++++++- 1 file changed, 38 insertions(+), 1 deletion(-) diff --git a/api/questions-to-ask-GN.md b/api/questions-to-ask-GN.md index 5d0a7e2..4f5f553 100644 --- a/api/questions-to-ask-GN.md +++ b/api/questions-to-ask-GN.md @@ -352,7 +352,44 @@ curl -s "https://genenetwork.org/api/v_pre1/correlation?trait_id=1427571_at&db=H ## Return datasets are relevant to diabetes? -TBD +``` +curl -s "https://genenetwork.org/api3/api/search/?query=diabetes&per_page=2&type=phenotype" +[ + { + "authors": [ + "Gerling", + "I" + ], + "dataset": "Islets-GerlingPublish", + "dataset_fullname": "Islets-Gerling Phenotypes", + "description": "Cofactor, metadata: Cohort (0=control, 1=AB+, 2=type 1 diabetes, 3=type 2 diabetes) [cohort]", + "group": "Islets-Gerling", + "mean": 1.3103448275862069, + "name": "10003", + "species": "human", + "year": 2017 + }, + { + "additive": 1.28571428571429, + "authors": [ + "Weerasekera S", + "Morahan G" + ], + "dataset": "BXDPublish", + "dataset_fullname": "BXD Published Phenotypes", + "description": "Metabolism, pancreas, visual system: Diabetes model, alloxan response (80 mg/kg iv to induce diabetes by killing pancretic beta cells), retinopathy severity score, males and females from 7 to 17 weeks of age [ordinal scale, 1=normal, 2=slight retinopathy, 3=moderate, 4=severe retinopathy]", + "geno_chr": "6", + "geno_mb": 3.266392, + "group": "BXD", + "inbredsetcode": "BXD", + "lrs": 22.082744135228, + "mean": 2.8333333333333335, + "name": "15958", + "species": "mouse", + "year": 2012 + } +] +``` ## What phenotypes do we have for a certain dataset? -- cgit v1.2.3