Age | Commit message (Collapse) | Author | |
---|---|---|---|
2 days | Fix minor issues caught by mypy. | Frederick Muriuki Muriithi | |
2 days | Bugfix: Fix clauses for user listing query. | Frederick Muriuki Muriithi | |
2 days | Fix some linting issues. | Frederick Muriuki Muriithi | |
2 days | Bugfix: Build up "WHERE" clauses correctly | Frederick Muriuki Muriithi | |
Have the email and name checked with "OR" where both are present. | |||
2 days | Provide missing symbol. | Frederick Muriuki Muriithi | |
2 days | Bugfix: Set the correct value. | Frederick Muriuki Muriithi | |
10 days | Delete system users. | Frederick Muriuki Muriithi | |
11 days | Search in names too. Fix query params. | Frederick Muriuki Muriithi | |
11 days | Enable filtering of data, and limiting length. | Frederick Muriuki Muriithi | |
2025-06-11 | Fix code issue caught by type-checker. | Frederick Muriuki Muriithi | |
2025-06-11 | Fix code issues caught by the linter. | Frederick Muriuki Muriithi | |
2025-06-09 | Add inbredset-group resource type in unlinked_data function | zsloan | |
This still needs to be implemented, but this commit prevents the key error | |||
2025-06-09 | Enable linking multiple data items to a resource in single request. | Frederick Muriuki Muriithi | |
2025-06-09 | Use more flexible check for authorisation. | Frederick Muriuki Muriithi | |
Use the more flexible check for authorisation that a user has on a specific resource. | |||
2025-06-09 | Add function to fetch the wrapper resource for a specific group. | Frederick Muriuki Muriithi | |
2025-06-09 | Add a function to fetch the system resource. | Frederick Muriuki Muriithi | |
2025-06-09 | Check for a user's privileges on a particular resource. | Frederick Muriuki Muriithi | |
Add a general function to check that a particular user has certain privileges on a particular resource. | |||
2025-06-09 | Allow linking of data by passing the raw ids too. | Frederick Muriuki Muriithi | |
2025-05-06 | Fix failing mypy. | Munyoki Kilyungi | |
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
2025-05-05 | Fix "C0301: Line too long" pylint error. | Munyoki Kilyungi | |
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
2025-03-28 | Handle error raised in the case the request is not JSON | Frederick Muriuki Muriithi | |
2025-03-28 | Simplify line where it was unnecessarily checking request.json twice | zsloan | |
2025-03-14 | Add missing fix: Make display of minutes more human-friendly. | Frederick Muriuki Muriithi | |
2025-03-14 | Make display of number of minutes more human-friendly. | Frederick Muriuki Muriithi | |
2025-03-14 | Move expiry of auth-based emails into a config variable. | Frederick Muriuki Muriithi | |
To ease setting up of value without changing code, move the value out into a configuration variable. | |||
2025-02-26 | Fix pylint errors. | Frederick Muriuki Muriithi | |
2025-02-26 | Remove use of obsolete flask_helpers module. | Frederick Muriuki Muriithi | |
Create the requests in the class, as appropriate, checking for content-type. | |||
2025-02-17 | Use default sys-admin group if user is not a member of any group. | Frederick Muriuki Muriithi | |
Instead of failing, assign any population resource to the default system admin group, if the user is not a member of any group. | |||
2025-02-17 | Provide a way to fetch a system-administrator's group. | Frederick Muriuki Muriithi | |
2025-01-10 | Update server to support non-expiring JWTs. | Frederick Muriuki Muriithi | |
2025-01-10 | Override `generate` to generate tokens without expiry. | Frederick Muriuki Muriithi | |
2025-01-10 | Rework `get_token_data()` to only set 'exp' if its provided. | Frederick Muriuki Muriithi | |
2025-01-10 | Allow for non-expiring JWT tokens. | Frederick Muriuki Muriithi | |
2024-12-31 | Log out exceptions with the application's logger | Frederick Muriuki Muriithi | |
2024-12-31 | Allow the request to redirect from HTTP to HTTPS where relevant. | Frederick Muriuki Muriithi | |
2024-12-31 | DEBUG: See the Public JWKS uri. | Frederick Muriuki Muriithi | |
2024-11-22 | Delete local mariadb connections module. | Frederick Muriuki Muriithi | |
We no longer need this module after moving the code to use gn-libs. | |||
2024-11-22 | Use code in gn_libs for MySQL/MariaDB connection. | Frederick Muriuki Muriithi | |
Update the application to use the gn_libs code for connecting to the database, rather than using a local module. | |||
2024-11-08 | Revert "Debug: Add debug logging to trace JWK fetching." | Frederick Muriuki Muriithi | |
This reverts commit 5a6dc1fb81bf223750f42f4697f3cd7d86b39e71. Remove debugging statements and restore original code. | |||
2024-11-05 | Debug: Add debug logging to trace JWK fetching. | Frederick Muriuki Muriithi | |
2024-11-04 | Output KeySet retrieved from the client. | Frederick Muriuki Muriithi | |
2024-10-09 | Linting: Fix minor linting errors | Frederick Muriuki Muriithi | |
2024-10-09 | Fix masquerading logic | Frederick Muriuki Muriithi | |
Update the code to actually use JWT bearer tokens that the older plain authorisation tokens that were previously used. | |||
2024-10-09 | Add a client to the JWTBearerToken objects. | Frederick Muriuki Muriithi | |
2024-10-09 | Update Configs: Change `OAUTH2_SCOPE` => `OAUTH2_SCOPES_SUPPORTED` | Frederick Muriuki Muriithi | |
Use the OAUTH2_SCOPES_SUPPORTED application configuration variable, that is used by the flask integration for the Authlib library to set up the supported scopes. | |||
2024-10-09 | Pass on all GET parameters when redirecting. | Frederick Muriuki Muriithi | |
2024-10-09 | Put routes behind auth. | Frederick Muriuki Muriithi | |
2024-10-03 | BugFix: Fetch also roles assigned to user | Frederick Muriuki Muriithi | |
When fetching the resource roles, fetch also any roles that are assigned to the user for that resource. | |||
2024-10-03 | BugFix: Remove duplicates from resources list | Frederick Muriuki Muriithi | |
Issue: https://issues.genenetwork.org/issues/gn-auth/resources-duplicates-in-resources-list The query was returning multiple instances of the same resource in situations where a user had more than one role of a particular resource. | |||
2024-10-03 | Provide a way to change OAuth2 client secrets. | Frederick Muriuki Muriithi | |