| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2 days | Update command in documentationHEADmain | Frederick Muriuki Muriithi | |
| Use a command that will work in environments other than the author's environment. | |||
| 5 days | Handle error raised in the case the request is not JSON | Frederick Muriuki Muriithi | |
| 5 days | Add link to register account to sign-in page | zsloan | |
| 5 days | Simplify line where it was unnecessarily checking request.json twice | zsloan | |
| 2025-03-14 | Add missing fix: Make display of minutes more human-friendly. | Frederick Muriuki Muriithi | |
| 2025-03-14 | Make display of number of minutes more human-friendly. | Frederick Muriuki Muriithi | |
| 2025-03-14 | Move expiry of auth-based emails into a config variable. | Frederick Muriuki Muriithi | |
| To ease setting up of value without changing code, move the value out into a configuration variable. | |||
| 2025-02-28 | Remove dead comment. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-02-26 | Fix pylint errors. | Frederick Muriuki Muriithi | |
| 2025-02-26 | Remove use of obsolete flask_helpers module. | Frederick Muriuki Muriithi | |
| Create the requests in the class, as appropriate, checking for content-type. | |||
| 2025-02-26 | Temporarily comment out xapian-bindings as a dependency. | Frederick Muriuki Muriithi | |
| 2025-02-26 | Use minimum versioning for dependencies rather than fixed | Frederick Muriuki Muriithi | |
| Change == to >= to specify the minimum version but allow newer ones too. | |||
| 2025-02-26 | Make list of dependencies an actual list — add missing commas. | Frederick Muriuki Muriithi | |
| 2025-02-17 | Use default sys-admin group if user is not a member of any group. | Frederick Muriuki Muriithi | |
| Instead of failing, assign any population resource to the default system admin group, if the user is not a member of any group. | |||
| 2025-02-17 | Provide a way to fetch a system-administrator's group. | Frederick Muriuki Muriithi | |
| 2025-02-03 | Left-align the labels.genenetwork-system-v1.0.0 | Frederick Muriuki Muriithi | |
| 2025-02-03 | Remove pagetitle values. | Frederick Muriuki Muriithi | |
| 2025-02-03 | Improve layout and styling for the login page. | Frederick Muriuki Muriithi | |
| 2025-02-03 | Improve page copy for the authorisation server. | Frederick Muriuki Muriithi | |
| 2025-01-13 | Test post-commit receive hook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-13 | Test post-receive hook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-01-10 | Update server to support non-expiring JWTs. | Frederick Muriuki Muriithi | |
| 2025-01-10 | Override `generate` to generate tokens without expiry. | Frederick Muriuki Muriithi | |
| 2025-01-10 | Rework `get_token_data()` to only set 'exp' if its provided. | Frederick Muriuki Muriithi | |
| 2025-01-10 | Allow for non-expiring JWT tokens. | Frederick Muriuki Muriithi | |
| 2024-12-31 | Log out exceptions with the application's logger | Frederick Muriuki Muriithi | |
| 2024-12-31 | Allow the request to redirect from HTTP to HTTPS where relevant. | Frederick Muriuki Muriithi | |
| 2024-12-31 | DEBUG: See the Public JWKS uri. | Frederick Muriuki Muriithi | |
| 2024-12-20 | Change log-in page template HTML | zsloan | |
| - Limit width of email/password input fields so they don't stretch across the entire screen - Change 'Authorise' to 'Log in' - Put fields in columns and align the 'Log in' button with the text fields (couldn't figure out a good way to do this, so did something weird with a negative margin on the button) | |||
| 2024-11-22 | Remove imports that are no longer used. | Frederick Muriuki Muriithi | |
| 2024-11-22 | Fix type and return of the `setup_logging` function. | Frederick Muriuki Muriithi | |
| 2024-11-22 | Delete local mariadb connections module. | Frederick Muriuki Muriithi | |
| We no longer need this module after moving the code to use gn-libs. | |||
| 2024-11-22 | Use code in gn_libs for MySQL/MariaDB connection. | Frederick Muriuki Muriithi | |
| Update the application to use the gn_libs code for connecting to the database, rather than using a local module. | |||
| 2024-11-22 | Add `gn-libs` as new dependency. | Frederick Muriuki Muriithi | |
| Bring in the `gn-libs` library as a dependency to help with avoiding replication of code across the various GeneNetwork projects — with this in place, we can now reuse previously written code that is common across the various projects, which helps with reducing the maintenance burden. | |||
| 2024-11-15 | Make authorise-user template more consistent with GN2 style | zsloan | |
| 2024-11-08 | Revert "Debug: Add debug logging to trace JWK fetching." | Frederick Muriuki Muriithi | |
| This reverts commit 5a6dc1fb81bf223750f42f4697f3cd7d86b39e71. Remove debugging statements and restore original code. | |||
| 2024-11-05 | Debug: Add debug logging to trace JWK fetching. | Frederick Muriuki Muriithi | |
| 2024-11-04 | Move logging setup functions to gn_auth.__init__.py module | Frederick Muriuki Muriithi | |
| To ensure that logging will always be setup correctly, move the functions into the __init__.py module and call it within the create_app(..) function as before. | |||
| 2024-11-04 | Output KeySet retrieved from the client. | Frederick Muriuki Muriithi | |
| 2024-11-04 | Add debug-logging module. | Frederick Muriuki Muriithi | |
| Useful for debugging in remote environments. | |||
| 2024-10-09 | Linting: Fix minor linting errors | Frederick Muriuki Muriithi | |
| 2024-10-09 | Fix masquerading logic | Frederick Muriuki Muriithi | |
| Update the code to actually use JWT bearer tokens that the older plain authorisation tokens that were previously used. | |||
| 2024-10-09 | Add a client to the JWTBearerToken objects. | Frederick Muriuki Muriithi | |
| 2024-10-09 | Update Configs: Change `OAUTH2_SCOPE` => `OAUTH2_SCOPES_SUPPORTED` | Frederick Muriuki Muriithi | |
| Use the OAUTH2_SCOPES_SUPPORTED application configuration variable, that is used by the flask integration for the Authlib library to set up the supported scopes. | |||
| 2024-10-09 | Pass on all GET parameters when redirecting. | Frederick Muriuki Muriithi | |
| 2024-10-09 | Put routes behind auth. | Frederick Muriuki Muriithi | |
| 2024-10-03 | BugFix: Fetch also roles assigned to user | Frederick Muriuki Muriithi | |
| When fetching the resource roles, fetch also any roles that are assigned to the user for that resource. | |||
| 2024-10-03 | BugFix: Remove duplicates from resources list | Frederick Muriuki Muriithi | |
| Issue: https://issues.genenetwork.org/issues/gn-auth/resources-duplicates-in-resources-list The query was returning multiple instances of the same resource in situations where a user had more than one role of a particular resource. | |||
| 2024-10-03 | Provide a way to change OAuth2 client secrets. | Frederick Muriuki Muriithi | |
| 2024-09-30 | Refactor: Initialise phenotype package | Frederick Muriuki Muriithi | |
| * Move code into a new phenotypes package and update references. * Add new functions to fetch linked resources from GN3 data identifiers — this is useful for auth * Provide endpoint to fetch authorisation details for a specific phenotype. | |||
 |
index : gn-auth | |
| GN authentication and authorization service |
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